Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | IDTTLLKCYLQTNDALVSPLLRINNCHLEESEKVLLEYEKYPELVILYQTKGLHAKALKLLQSQAKQENSPLFGAQRTIRYLQHLGEDHMDIILKFSSWIL |
1 | 6tnfB3 | 0.07 | 0.07 | 0.99 | 1.17 | DEthreader | | KAAFQIRQFQSLLITILSTLSKLLDPQFLQFLTWTVKICKGLLTLLFSLHVLYK-SPVSLLRELESIKTAPTLLVLGQADKVLEEWIRQLGTLLTVFHELV |
2 | 6tnfB | 0.06 | 0.06 | 1.00 | 1.17 | DEthreader | | KAAFQIRQFQSLLITILSTLSKLLDPQFLQFLTWTVKICKKGLTLLFSLHVLYKSSLLRELAQIESIKAAVCLLVLGQADKVLEEWIVQLGTLLTVFHELV |
3 | 6wcjA | 0.12 | 0.11 | 0.94 | 1.12 | HHsearch | | MFTELAILYSKFKPQKMREHLELSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPT--D--AWKEGQFKDIITKV--ANVELYYRAIQFYL |
4 | 4in3B1 | 0.18 | 0.16 | 0.87 | 1.00 | DEthreader | | FANNFIKLFPLVYGNLVETLVEIVTKSLEACRKMLKKLIAVIILIRVYFACDLEIDAVDLINEQLSSFAQLKS----L--QS-FLLVKR--AK--A--EAT |
5 | 4u1dC | 0.05 | 0.05 | 0.99 | 1.17 | DEthreader | | VVFKFLEIGVELKKGKLKDGLHQYKVVARKFIDLVESKITWESYRAVLDLLETYSGVVKKTMHFCLKYQR-KNEFKRLAEMLRQHLNLLYLDQRFQQVVSA |
6 | 4u1dC | 0.06 | 0.06 | 0.99 | 1.17 | DEthreader | | LVFKFLEIGVELKGKLLKDGLHQYKVVARKFIDLVESKITWESYRAVLDLLLTYSGVVKKTMHFCLKYQ-RKNEFKRLAEMLRQHLNLLYLDQRFQQVDVS |
7 | 6wcjA | 0.14 | 0.14 | 0.98 | 0.48 | HHpred | | MFTELAILYSKFKPQKMREHLELSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAKSPRLDHTRAVNYFSKV--KQLPLVKPYLRSVQ |
8 | 3iegA | 0.14 | 0.13 | 0.95 | 0.52 | DisCoVER | | VHLELGKKLLAAQLADALSQFHAAGDNYIAYYRRATLAAALPDLTKVIALKDFTAARLQRGHLLLK--QGKLEAEDDFKKVLKSNP--SEQEEKEAESQL- |
9 | 6wcjA | 0.13 | 0.12 | 0.93 | 0.55 | MRFsearch | | -FTELAILYSKFKPQKMREHLEWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDA-WKEGQFKDIITKVAN-----VELYYRAIQFYL |
10 | 6wcjA | 0.12 | 0.11 | 0.94 | 0.86 | SPARKS-K | | MFTELAILYSKFKPQKMREHLELFWVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPT----DAWKEGQFKDIITKVANV--ELYYRAIQFYL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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