Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IEGKKNDAIHRDMERTYQHLEFCFDHYINLNYFANWFDNELNKNFGIDVIKSDIDNNEPFYLFKNKKTEVMLIKCEHLNKLDSDIAKFLNVDGFILKNSNEAKNKWYSNIYSHFKDTYDFSKLFYMYDLPLYRHLYS |
1 | 1texD | 0.09 | 0.07 | 0.80 | 0.65 | DisCoVER | | HPTAYLVLASQRSGSLLVESL--RA----TG-VA-GE--PQ-EFFQY------L----PNTSMSP-LIEGKPDLAPATIWRDYIQTVGTGVWGGKLMVLIHIHRPIDVDYPYLWRNVVGLEALGQDPRLAPK----- |
2 | 1itkB | 0.05 | 0.04 | 0.74 | 0.83 | DEthreader | | RMILAGNVAIESMGFK--T--F--GYAGGRED----------------EFETQERFDEISVMG------LIYVNPDASAKIRQTFDRMAMNKELGGFGKVPWPMMLTTDIALKYMFNAYKRMGWQ-DSD---A---- |
3 | 3dwcB | 0.05 | 0.05 | 1.00 | 0.59 | CEthreader | | RSWLPELLKEVQEKQKALGETVLEPKGPFPVSKQEALCRFFMDVWKFDFDGGRLDVSAHPFCGNSKEDVRITTKVTSLLGVIHETGHAKYLFAEMQIGRSGAFMEFLAPRLVEYFGDQPAFTSSNMKRVIQRVSPGL |
4 | 1fbvA2 | 0.02 | 0.01 | 0.90 | 0.73 | EigenThreader | | TKADAAEFWRKAFGEKTKSFRQALHEVHPIEAMALKSTIDIFTRLFQLAVTAFLTKPGSYIFRLSLGQWAIGYVTADLIDGFREYLFPDGRNQNPDLTGLCEPTPQDH----------IKVT--QEQYELYCEMG-- |
5 | 2q01B1 | 0.09 | 0.07 | 0.83 | 0.29 | HHpred | | ---LDALKVRSVPDTDPREAWRVFASHFRGTPSWVWLNHVFSQVFGFTEFLEASNATDAFRLFDRFNIETLATTEGPHESLHAAIRES-GWG-GHVITAFLSIP-ARHDVARRVDSAFLA----------------- |
6 | 3bfxA | 0.13 | 0.07 | 0.58 | 0.58 | MRFsearch | | ---------------TWEEYFETFING--KVVWGSWFDHVKG-----------------WWEMK-DRHQILFLFYEDIKHEIRKVMQFMGKK-------------VDETVLDKIVQETSFEKMKENF---------- |
7 | 2ayaA | 0.05 | 0.04 | 0.86 | 0.45 | FFAS-3D | | ------KALEHE--KTPELAAKLAAE---AIERDPW--AAQVSQLSLP--KLVEQVALNAWKEESDNAVCLHLRSGAQQKLAEALSMLKGSTELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ---- |
8 | 2kpoA | 0.05 | 0.04 | 0.78 | 0.71 | SPARKS-K | | --MLLYVLIISNDKKLIEEARKMAEKALELRTVEDELKKYLEEFRK-----------------ESQNIKVLILVSN--DEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH--------- |
9 | 2fgeA | 0.06 | 0.04 | 0.75 | 0.62 | CNFpred | | ----------------VPLFCQSLLEMGTKDLTFVQLNQLIGRKGGISVY---------PLTSSVEPCSKIIVRGKSADDLFNLMNCLLQE--VQFTDQ-----QRFKQFVSQSRARM--ENRLRGSGHGIAAARMD |
10 | 3f5fA | 0.09 | 0.07 | 0.79 | 0.83 | DEthreader | | KNYYFLRRKQGD-KKTDECVGGDCAPEK-LWLQIPFFCGH-------QAKYNLI--------N-E---YFLVGVTEELEDFIMLLEAALPFRGALYSHLRKT--TE--KK-L-PTAATILQSWKMENEF--YEFALE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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