>PF10359 (513 residues) GLKVRFDSFMLDLHQRREEFNTRDHGRKTQSRTSGIKIHAAQLDLANADVRAVSASIRGT TTEAIKKGTLANLSIDQVETADVSRFTIPDNDLTWIDMDDFVELDWILPTEPNPDTKILP LAFAPRLTYFRQTDIGGSIAGDPDRTSPFGDEPTHFCIMTRDDDPRRVQAHLIQERLDQL EVQIENHGRTLGEAELKMVRDDSNNPIFAADFEALRRHSSVLRDKKAFLENMAQQLTSKS PTHGKMPKFKGDAASEASIEVDRESMKIPSGAEFESDAQNRFVIHNLHFKWNNLLRNIVL RYTHQVSQRRGFIYYLSRPAVKFIIDIVEEQYKAKFGTKTANGKAATDDNSTDPSFMDRE TQEDIEERIKRILQDGRKFVNADQTDATDTSTNVAMEDLTGGISEDFRAQSNYHVRVIAP QIQLQSDKNKKNVVLLTAKGMELRVVEIMDKERLSDAVSGLVQRRILVSMDSTQFFVTHQ KWFSTHLVSMYAGSQYGTPVSTSWPPWVPMEVM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | GLKVRFDSFMLDLHQRREEFNTRDHGRKTQSRTSGIKIHAAQLDLANADVRAVSASIRGTTTEAIKKGTLANLSIDQVETADVSRFTIPDNDLTWIDMDDFVELDWILPTEPNPDTKILPLAFAPRLTYFRQTDIGGSIAGDPDRTSPFGDEPTHFCIMTRDDDPRRVQAHLIQERLDQLEVQIENHGRTLGEAELKMVRDDSNNPIFAADFEALRRHSSVLRDKKAFLENMAQQLTSKSPTHGKMPKFKGDAASEASIEVDRESMKIPSGAEFESDAQNRFVIHNLHFKWNNLLRNIVLRYTHQVSQRRGFIYYLSRPAVKFIIDIVEEQYKAKFGTKTANGKAATDDNSTDPSFMDRETQEDIEERIKRILQDGRKFVNADQTDATDTSTNVAMEDLTGGISEDFRAQSNYHVRVIAPQIQLQSDKNKKNVVLLTAKGMELRVVEIMDKERLSDAVSGLVQRRILVSMDSTQFFVTHQKWFSTHLVSMYAGSQYGTPVSTSWPPWVPMEVM | |||||||||||||||||||
1 | 2pl5A | 0.06 | 0.03 | 0.56 | 0.83 | DisCoVER | GSIGI-IE--TKYAEFKELILNN-------GSVLSPVVI--A-----------YETYGTLSSSKN--------------NAILIDAHAAGYHSGKPGWWDDYIGKSFDTNQYFIICSNV--IG--GCKG-SSGSIHRFPFVSIQDMAQLL-VESLGIEKL---FCV--A--G-----------------------------------------------------------G----------------SMGGMQALEWSI------------------AYPNSNCIVMAS--------------------------TA-EHSMQIAFNEVGRQ-AILSDPNWKNGLY-----DENSPRKGLA-LARMVGHITYLSYIYVTALDHYSL--------G------KGKELTAALSNATCRFLVVSY--------SSDWLYPPAQSREIVKSLEAA---------DKRVFYVELQSGEGHDSF---L-------LK-NPKQI---EILKGF------ | |||||||||||||
2 | 3ir7A | 0.07 | 0.04 | 0.59 | 0.50 | DEthreader | --FYDW-CDLPPASP-------------------------QT-------WGEQTDVPESADW-YNSSYI----------RTPDA-------------------TPDAEIAKL----------------AMALAMGHVM-REFN-SYF--YVRYTDMMVMLEERDGYYAAGRMLRTVAFNTGEMVAPNG---------------------KGKWNLEQRDGKTG--T------L---QD-EIAEVGFP--EL---LLHKLPVDAGLER-ADHGRSMIIVLLDMNRG-------RPARHMNSTSYFYSQW-YETVTALGHLIDFNVRAERSPQLGTNPLTIAGEAEK-------AGMNPVDYTVKSLKEG--RF-------KPEEVDWQDGLEKL--STC-WNTSDM----------------IQHDSGGKTWSRTLQHWDFGRPPIFLTPHQKWGIHSTYHA------ITPKPTHMI------------------------------------- | |||||||||||||
3 | 1vt4I | 0.05 | 0.04 | 0.99 | 0.70 | CEthreader | IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3bryA | 0.06 | 0.03 | 0.41 | 0.78 | EigenThreader | NPATLGHFSLGLDVVSTDIKVTTASSGNHGN---NNGPYFAPQTAFVYRQGR-------------------------------------------------------------------YAFGAGIFAEGQYGGSSFLSRTSNGVDT---------------------------------------------------------------------------------------------------------------------------------GLDQFLRVPFSAAYHVT-----------------------------------------------------------------------------------DDVSQIGTLAGQGRVSGTLVPTLLGVPGLSGGYISGVQAWGIGGRLGLTYQD--TRIGAAYQAGDLTGQATLSAVGNIPL-------KGDVTVRNPAQLTVGIS-----HQFN-----DQWSSVMKQSGSAANLDLS | |||||||||||||
5 | 2k48A | 0.19 | 0.04 | 0.20 | 0.34 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------HHHHHHGKPIPNPLLGLDSTENLYFQGI-DPFMSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDP--DDVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2xzrA | 0.11 | 0.02 | 0.20 | 0.48 | MRFsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------IEDKIEEILSKIYHIENEIARIKKLIGAIDGRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHKE--------------------------------------------------------------------------MKQIEDKIEEILSKIYH-------------------------------IENEIARIKKLIKL------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 5n77A2 | 0.12 | 0.03 | 0.25 | 0.78 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------------V----DGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGHQGDDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARL-------------------------------------------------PGGQLEQAREILRDIESLLPHNESLFQK-VNFLMQAAMGFINIEQNR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5wtjA1 | 0.12 | 0.11 | 0.86 | 0.79 | SPARKS-K | NELNKI--FSIDFFDREKNYVLDKKILNS-------KIKIIDLDF-----------IDNKNRNRILHAISKERDLQGTQDDYIQNLKISDEEVSKALNLDVVFINDIKISEENNN----DIKYLPS---FSKVLPEILNLRNNPKNEPFDTIET-----------EKIVLNALIYVNKELYKKLILEDDLLQELKKTLGNIDEIDENIENYYKNAQISASKKKYQKKVIECYIGYLRKNYEEDFSDFKNIQEIKKQIKDINDNKTYERITTSDKTIVINDDFYIISIFALLNNAVINKIRNRFFATSVWLNTSEY--QNIIDILDEILNTLRNECITENWNLNLEKEIEKDFDDFKIQTKKNNYYEDIKNNILLEKIKFE-IDKKSNILQDEQRKLSNINKKKVDQYDKDQEILCRII-----FNSDEDE--------------------SENEN-----KFQEIYYPKERKNELYIYKKNLFLNIGNPNF-DKIYGIKADAKFLFNIDGKNI | |||||||||||||
9 | 5xeiA | 0.14 | 0.07 | 0.53 | 0.53 | CNFpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------EELKQAEENLARVDLLIKEVKKQLDKLEKERNDA---LRYLDLKERLERARVALLLGEIKRLESMIDEGERKRAEIEENTIKVKSAQLRIQLEEKRRELKH--DAALIRSV----------KEVSLDLEVLRKEIEDMEAEIKALE-PVNMKAIEDFEVVERRYLEL--KSKREKLEAEKESIIEFINEIEKEKKNVFMRTLEAIAKN--------------------FSELFAKLSPGGSA----RLILENGGLEIEAKP-EKALTALAFKPAPFYLFDEID-AHLDDANVKRVADLIKESSRESQFIVITLRDVM----------------------------- | |||||||||||||
10 | 5mu1A | 0.08 | 0.05 | 0.58 | 0.50 | DEthreader | FPSPYELTA--------------------------------ALSLRTATPVEYYTEPSLSG------------------TQEGCDQWFLDRLYADITSKS---------------RYRR------VNGYGVELVLKRTDYIIKPLEKLTQDFPGSNVLWL--LLQILVLLTRERKLISLNVNKIYIMALTVLDIVLKREKLDLETALE-AGDNFVILNGRVLERSVALSTISDPTVRTTLFKWSSFEVGDA--SELSSPSFDEKALSARFT-TLLVVGMDVPPAW-ILI-----ETENNPHFADFKAN---HANIFSLNMMASVMHHTN--------------------------------RTDMYDLVEHPLYGFYVVDLQRFREL-AAGDRLRQQY-SLNLDQDL------------------------------------------LCNPKLAY-------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |