>PF10355 (291 residues) GFVALATGVVTYGRFFEGSSIFNGLAHWIKGGIFFWYGILTLGRWAGCFGELGWAWNVRP KTVAGQKWRPSAEFVESALIFTYGSTNIFLEHLGGWGGEWTATDLEHVSITVLFIGGGLC GMLIESTRIRDLLNSTVTEAAHAYPEHAYHDEERDALRPPKQYEFSINPIPALVILLLGI MMSSHTQASMTSSMIHKQWGNLLAGASYARGFTYVIMYLKPPKSILPSRPPTELLTAFGL IAGGIIFMASSGDTVEGMIHYKLDEMFIYTVTMGFVGLLMAWVILCIALKG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GFVALATGVVTYGRFFEGSSIFNGLAHWIKGGIFFWYGILTLGRWAGCFGELGWAWNVRPKTVAGQKWRPSAEFVESALIFTYGSTNIFLEHLGGWGGEWTATDLEHVSITVLFIGGGLCGMLIESTRIRDLLNSTVTEAAHAYPEHAYHDEERDALRPPKQYEFSINPIPALVILLLGIMMSSHTQASMTSSMIHKQWGNLLAGASYARGFTYVIMYLKPPKSILPSRPPTELLTAFGLIAGGIIFMASSGDTVEGMIHYKLDEMFIYTVTMGFVGLLMAWVILCIALKG | |||||||||||||||||||
1 | 3gi9C | 0.09 | 0.09 | 1.00 | 1.09 | SPARKS-K | EAVSMAVGVMIGASIFSIFGVRNLPETFILSGIYALLVAYSYTKLGAKIVSNAIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLIAPINTFNIAITEIGIVAFFTALNGS-KAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAISYMGFGVITNASENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDIKASENALAVAGALFSISSAMNATIYGGANVAYSLAKDFFERKMEGVASITSAVFMVIYLFVILSHYI | |||||||||||||
2 | 7a23M | 0.08 | 0.07 | 0.86 | 1.19 | CNFpred | LFFVILTTFLIPICILVG-KEYIIAFLICEFAVFCMLDLLLFYVFPESVLIPMFIIIGVWGSRQRKIKAAFLYTLLGSLFMLLAILLILTDLQILLTTEFSERRQIFLWIAFFASFAVKVPMVPVHIWLPEAHVEA---------------------------PTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQ--------IDLKKIIAYSSVAHMNLVTIGMFSPNIQGIG-----GSILLMLSHGLVSSALFLCVGVLYDRH | |||||||||||||
3 | 5tsaA | 0.09 | 0.05 | 0.59 | 0.71 | DisCoVER | -----------------------------------------------------VHVGYAVGGAAGFAATAGALMALR-AILAASAFSLILPGLDAAGTIVAAAAVV-ALG-LGLGVLLMLFTVNRVWLFVLTIILHNLPEGMAIGVSFAGLPLTSAIAIQDVPEGLAVA-LALRA------------------------------VGLPIGRAVLVAVSGLMEPLGALVGVGI------------------------SSGFALAYPISMGLAAG--AM-IF--VVSHE--- | |||||||||||||
4 | 4a01A | 0.06 | 0.05 | 0.80 | 0.83 | DEthreader | --F---Q-----NRTTLEARATAFRSGAVMGFLMGSDLFGSYAESSC-AALVVASI-SSFGLNHELTAMYPLIVSSVGILVCLLTTLFATDFF----EIKAVKEIEPALKKQLVISTVLMTIGV----AVVSFVALPTS-FT----------GV-QKDVKSQLLCVAVGLWAGLIIGFVTEYYTSNVQ-A---N--GL-LGYSVIIPIFAIAISIFVSFTFAA---MYGIAAALGMLS-IAGLAIDAYGPDNAGGAIRERTDALDAAGNTTAIG-GF--G----------- | |||||||||||||
5 | 4jkvA | 0.10 | 0.10 | 1.00 | 0.43 | CEthreader | HGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLSGQCEVPLVRTDNPKLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVA-DWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQASLLVEKINLFAMFGTGIAMSTWVWTKATLL | |||||||||||||
6 | 6nwfA | 0.08 | 0.05 | 0.65 | 0.83 | EigenThreader | VISMALGSVFFGFGAHNAKNQILYTLNFFICLIAAGLYLAMAL--------------------GLGVW------VRFVTWFCSTPLLLLDLTFLGR--TSLPLTGSLLGANAYMLVTGFVATVT---------------------------------------PKPMSYIWYIVSCAAYLAIVYLAAERKHFRTLVTVHLVLWTLYPIVWILS-------PEGFSTFTQGSETMFYTLLDIASKVGFGFLSLNTLHTLEQATE---------------------------- | |||||||||||||
7 | 6cfwH | 0.14 | 0.12 | 0.88 | 0.29 | HHpred | ---IMSIASYALVAFRNDTGIEAYMFAGSLASSFVLLGIALLYGIGGLLFKSGHMWLADPSSISAIKGSPTLGTI-GWIIIIFACITLIVGNAMAVVQE-DLKRVGQIGYILLGLGIGMAGITVNHALMKALLFLVAGAVIHE-IG--------TRNMNELSGLAKTMPKTTFAFLIGAAAIVGLPPLNGFASKAIAVIGTVFCTAAYVRALF-TFF-GRPSEKVNARDGIAMML-PMIILVVTIIVMGFFPWQIVPTARALWDVIDYISSLM------------------ | |||||||||||||
8 | 6li9B | 0.09 | 0.08 | 0.84 | 0.33 | MRFsearch | --ISIIVGTIIGSGIFVSEAVGPCLIIWAACGVLATLGALCFAELGTMIYLFSWASLI-------------VIKPTSFAIICLSFSEYVCAPFY-VGCKPPQIVVKCLAAAAILFISTVNSLSRLGSYVQNIFTAA-------------------------------KLVIVAIIIISGLVLLAQGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSYFTVSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGR | |||||||||||||
9 | 6irsB | 0.11 | 0.10 | 0.95 | 0.70 | FFAS-3D | --VAIIVGTIIGSGIFEAGSPGLALVVWAACGVFSIVGALCYAELGTTISKSGGLWIELL------------IIRPSSQYIVALVFATYLLKPLFPTCPVPEEAAKLVACLCVLLLTAVVKAATRVQDAFAAAKLLALALIILLGFVQIGKGDVSNLDPNFSFEGTKLDVGNIVLALYSGLFAGWNYLNFVTEEMLAIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGPVFVGLSCFGSLFTSSRLFFVGSREGHLPSLVFTCVMTLLYAWLCVALAIIGM-- | |||||||||||||
10 | 3l1lA | 0.12 | 0.12 | 0.97 | 1.05 | SPARKS-K | PVTLMVSGAIMGSGVFLLSTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCF--GPFLTNVLYWLACWIGNIAMVVIGVGYLSYFFPILDPWVLTITCVVVLWIFVLLNIVGP--KMITRVQAVATVLALIPIVGIAVFWFWFRGETYMAA------IQSTLNVTLWSASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFALIIVGILMTIFQLSVSVIFTLV | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |