Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LLVGEADFSFAASLAAAFGSSVSNLTATSLEYKRELEKVYSKAVDNIQELKSKGCNVFHAVDATVMASHPSFKNSVFDRIVFNFPFAVISEEEWGNLHLPAVLEKQHSLVREFLENAKKLISENGEIHITHRKDGIFGAWRIKFLASEQGFQVVEAVDFNICDYPGYNP |
1 | 4eueA | 0.11 | 0.11 | 0.99 | 1.17 | DEthreader | | LIVGA-SSGFGLATRISVAFPEAHTIGVSYETGAT-RRIGTAGWYNNIFFKEAKAKNFIEDAFSNTKDKKYIKDGKIDLFVYSLAAPRSRIKSSASIEEIEETRKVGEDWQEWCEELLYCFSDKATTIAYSYIYRIGIAKDLEDKAKLIKLNRAFVSVNKLENCIQIEF |
2 | 3zu2A | 0.06 | 0.06 | 0.96 | 1.17 | DEthreader | | LVIGA-STGYGLAARITAFGCGADTLGVF-FERPG-KPGT-SGWYNSAAFHKALAKSINGDAFDEIKQLDAIKQLQVDQVIYSLASPRNSAL--ATSEIDSTVAVMGEDWQMWIDALLDVLAEGAQTTAFTYLYWIGAAKDLDQKVLAISLDARVSVLKAVEGCIEQEF |
3 | 6k8vA | 0.08 | 0.07 | 0.92 | 1.17 | DEthreader | | LIAAGWELEIAQVQLA--CG--AQVVLGLPRA-ADVAI-A--EKRCKAGL-TEGLSI-IRFSRPAMEAAEEYTRTPISGALFMPALGAELSGAVEAEDAVEALMDELAGNMALARTMSRYWHDPPRFVFVSHASDDGHILATEQLIRIWEEWGNQIVRENIRFAG---- |
4 | 5xi0A | 0.09 | 0.08 | 0.97 | 1.17 | DEthreader | | LVVGS-SSGYGLSSRITAAFGGASTIGVFFEKAGT-PG-T-AGWYNSAAFDKAKSKSLNGDAFNEAKQKDLIKELQIDMVVYSLASPVSSLKE-ATEQEIKDTVTVGEDWELWINALSEVLADGCKTVAYSYIYWLGQAMDLDRAATALKLSTANVAVLKVEGCQEQEF |
5 | 4eueA | 0.11 | 0.10 | 0.95 | 1.17 | DEthreader | | LIVGA-SSGFGLATRISVFGPEAHTIGVS-YETGA--RIGTAGWYNNIFFKEALAKNFIEDAFSNTKDKKYIKDFKIDLFVYSLAAPSRIK---SSASEIEETRKVG--GEDWQEWCEELCFDKATTIAYSYIGRIGIKKDLEDKAKLIKLRAFVSVNKALHENCIQEF |
6 | 5wwqA | 0.15 | 0.14 | 0.92 | 0.78 | HHpred | | --LCAAPGGKTTHIAALMHDQ-GEVIALDKIFNK-----VEKIKQNALLLGLNSIRA-FCFDGTKAVKPP-FLPESFDRILLDAPCSGMGQRPNMCTWSVKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEVAWALTKFCLQLQPQEPQIG--GEGMR- |
7 | 4x1oA | 0.12 | 0.09 | 0.82 | 0.74 | DisCoVER | | VDVGTGDARTAYRQAIA--HPEWLVVGVDPA----W----QRMTETAVRAAGAPNLVLVSSAIE-TV-PAALH-GVADEVMVLMPWGKLLR---------GVV--LG--EADVLSGLRAVAKPGAPLEISIGTPLEIELVGLTDRLAALGWQVADVDLD-T--ISSSW- |
8 | 6h1dA | 0.18 | 0.16 | 0.87 | 0.53 | MRFsearch | | LEVGSGSGVVSAFLASMIG-PQALYMCTDINPE--------AAACTLETARCNKVHIQPVIT-DLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWANGREVMDRFFPLVPDLLSPRGLFYLVTIKE--NNPEEILKIMKTKGLQGTTALSR---------- |
9 | 6h1dA | 0.17 | 0.16 | 0.93 | 0.82 | SPARKS-K | | LEVGSGSGVVSAFLASMIGPQ-ALYMCTDIN-----PEAAACTLETARCN-KVHIQPVIT-DL--VKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAGRNGREVMDRFFPLVPDLLSPRGLFYLVTIK--ENNPEEILKIMKTKGLQGTTALSRQAGQETLSVL |
10 | 6ov4A | 0.12 | 0.11 | 0.92 | 0.47 | MAPalign | | LVTGASGRAIAERLAQD----GFYVIVNYAGNKAHA-------QATVEHIIEGQASAIQ-ADVVSLFQE-AKAINRLDVVVHSAGMPMAKITPESLPDFDKVIHTNLRGAFLILAHAAETVPDGGRIIALSTAYGPYIASGVEGLVHVLTVNAVAPGPTIGTPDEIAGV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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