>PF10351 (474 residues) VQKTSASLRYDKFNTLRLKYNDEVSGGENHPTSPHNVESRMDHLWVEFPQIRALCNSSQY YAMYIIVLDLLMYSEPLEKTRNERLEKIMLASDFSDLRGAPEMVIKLQERIRQLEEIKRQ FQINSKYLDKKGWEDRILLDKDLTRCEDELFFMMKAITSSQRKYDGTQTSGLLRWNISSQ QIVWHLVRDNNEPLMEFQLQRAEYDRTDNSDGSHINLMQIGKIVGLNLLPDAIYPEMFAP YSDAERGTFSEGGNQQMLRVYWYMLEAIAGIPVLDHFEVNLFPMKIQLEREVGKRLFEYM FPGSSEEKSSKNKSPFMVKHMQPLGKDETDQDDISASSSGVTITDYDKQDSASNTRAARS ATSASNFDSNSTYGDAKAKRFGVNRKGSKNHEQPSDDLTKMMSRASNYMTLAYVKIPSVV LCLSYKGKGDRNIEDVHDFVFRLPMIEYRNKTWSNLDLALALKKDVIKALISHT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VQKTSASLRYDKFNTLRLKYNDEVSGGENHPTSPHNVESRMDHLWVEFPQIRALCNSSQYYAMYIIVLDLLMYSEPLEKTRNERLEKIMLASDFSDLRGAPEMVIKLQERIRQLEEIKRQFQINSKYLDKKGWEDRILLDKDLTRCEDELFFMMKAITSSQRKYDGTQTSGLLRWNISSQQIVWHLVRDNNEPLMEFQLQRAEYDRTDNSDGSHINLMQIGKIVGLNLLPDAIYPEMFAPYSDAERGTFSEGGNQQMLRVYWYMLEAIAGIPVLDHFEVNLFPMKIQLEREVGKRLFEYMFPGSSEEKSSKNKSPFMVKHMQPLGKDETDQDDISASSSGVTITDYDKQDSASNTRAARSATSASNFDSNSTYGDAKAKRFGVNRKGSKNHEQPSDDLTKMMSRASNYMTLAYVKIPSVVLCLSYKGKGDRNIEDVHDFVFRLPMIEYRNKTWSNLDLALALKKDVIKALISHT | |||||||||||||||||||
1 | 2i9iA | 0.03 | 0.01 | 0.36 | 0.72 | DisCoVER | TSSVTPLDFN-----YPI-------------APQNHHVVGILTPRIQVSNLKPYIKFQDALINQI-----QTIFE-----------------------------------------------------------------------------KRGYQVLRFQDEKALKIFSVLDLKGWVGILEDKMNLKNPNLDTLVDQSSGSVWFNFYEPEHDFAVEVGTFQAMTYTYKHEKNKEDAIHK------------ILNRMYAVVMKKA-VTEL--------------------------------------------------------------------------------------------------------------------------------------KENID-----------------------------------------KYREAIDRM-------------- | |||||||||||||
2 | 6sytA | 0.06 | 0.03 | 0.55 | 0.50 | DEthreader | -----------LAHWNRLLLYLNLEKLMYRCWLTRIRSIMVGLLAG---------------------LCELHCPEAIQG----------------IAVWSSLLWINSEYQEHLCAMTGVDC-------------CI-SSFDKSVLTLANL--KA--C-----------------LKADNYSLSSFES-------GKFCTLLPPLSPD------PRELQSVQLLRSS------------------WQSITENVVKYLQTIAGPRLLTVSQ-SLPV-STQLCSSALIPLFSEALRELTAAKFARKRG--------LLAQCS-E--------------------WGLDEKTKLLYTAGQS-AMMLSCAIFCKSVLPSSVQAPEVAKSWAATDMTMFIN-ETPRFALWCTTPDE---------------------------------------------------------------- | |||||||||||||
3 | 6cbcB | 0.08 | 0.04 | 0.53 | 0.80 | CEthreader | ----------------------------------------------------------LEGLVAGLLNRFLGYVKNFD-PKQLKWEVWNGKVRLDNLELQREALDQLKLPINVIKGHLGHLVLHIPWKTLASEQVKINIEDVFLLASPK-----EEQKRTQTFAQALVTKIVDNLQITIRNIHIRYEDAISPFALGITLEEFSAVSTDTSIQSAHKLATLESLAIYWDTDAKLIGPGLKFFREIASSEHQFILKPVSGQAKIEIDKTGSHTVPRYKANLLFDEIGVVLDDQQYRDALVDLFHYFIRHQEYKKFQ---------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 6r2qB | 0.07 | 0.03 | 0.41 | 0.70 | EigenThreader | TNSSGSYDYND---RDNNTQIEQV-----SINNVNGTPYDNTSQRFKVAADYRITR-------------------------------------------------------------------------------------------------------------GYQDRETTDENTVWARFRVN----SFETWDMWVKGSYGQRDGSKYNLANRDRTQVEARVTHS-------------------------PIESGARYALDDYTDT--VIGLTESKDTSYDANISYM---------------------------------------------------------------------------------------------------ITDDSNYST-----------PTEDKVDVV-GAGISYNNLLENKL--RMGLDYTYS-DSNSNTQVRQG------------------I | |||||||||||||
5 | 1vt4I | 0.08 | 0.04 | 0.53 | 0.42 | HHpred | --------------------------------------------------FETGEHQYQYKDILSVFEDAFVDNMPKSILSKEEIDHIIMSDAVSGTLRLFWTLLSKQEEMVQKFVLRINYKFL----MSPIKTEMTRMYIERDRLYNDNKRLQPYLKLRQALLE---LRPAKNV--LIDGVTWVALDVCLSYKVQCKM-DFKIFWLNL-KNCNSPETVLEMLQK-------LLYQIDPNWTSRSDHSSNSKPYENLVLLNVQNAKNFKQVTDFLSTHISLDHHSMTLTPDEVKSLLKYL-DCRPQDLEVLTTNPRRLS----------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6cbcB | 0.09 | 0.03 | 0.35 | 0.55 | MRFsearch | --HLVLHIPWKT----------------------------SEQVKINIEDVFLLASPKTQTFAQALVTKIV-----------------------------------------------------------------------------------------------------DNLQITIRNIHIRYEDAIHPFALGITLEEFSAVSTDSSIQSAHKLATLESLAIYWDTDAKLHQFILKP---------------VSGQAKIEIDKTGSHTVPRYKANLLFDEIGVVLDDQQYRDALVD--------------------------------------------------------------------------------------------------LFHYFIRHQEYKKFQ-------------------------------------------------------------- | |||||||||||||
7 | 1ml5Z | 0.13 | 0.07 | 0.52 | 0.64 | FFAS-3D | --------------------------------------------------------NNRIQDLTERSDVLRGYLD--YDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED--VSGLLELAVEFNEAVAELDALEEKLAQLEFRRSGEYDSADCYLDIQAGSGIIEESEGEVAGIKSVTIKISRLVRKSPFDSGGRRHTSFSSAFVY-------------PEVDDDIDIEINPAD---LRIDVYRTSGAGGQHVNSAVRITHIPTGIVTQDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6vnoA | 0.10 | 0.09 | 0.92 | 0.65 | SPARKS-K | YEGEEVAVKIFNKHTSLRLLRQELVVLCHLHHP-----SLISLLAAGIRPRMLVMETLQHRIALHVADGLRYLMIIYRDLKPHNV--LLFTLYPNAAIRAPEVARQQADVYSFGLLLYDILTTGGRIVEGEFDELEIQVEKLIKQCSAQVFDILNSAELVCLTRRLLPKNVIVECMVATHSIWLGCGHTDRGQLSFLDLNTEGYTSEEVADSRILCLALVHESWIVSGTQSG---TLLVINTEDGKKRTLEKMTDS---VTCLYCN---------FLLVGTADGKLAIFED-----------KTVKLKGAAPLKILNIGNVSTPLMCLSESNVSNDFTIQKLIETR-TSQLFSYAAFSDSNIITVVVDTALYIAKQNSPVVEVWDKKTEKLCGLIDCVHFLREVMMSYNTALWIGTGGG-HILLLDLSTRRLIRVIYNFSVRVMMVLGYNTVWDI-NLPHEVQNLEKHIEVRKE | |||||||||||||
9 | 3h4zA | 0.13 | 0.07 | 0.59 | 0.59 | CNFpred | --------------------------------------------FVGVLSAGINAASPNKELAKEFLENYLL-----TDEGLEAVNKDKPLGAVA----LKSYEEELDPRIAATMENAQKGEIMPNIP--QMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAD-----IHYDKITEEINKAVDEA-SETFDPMKVPDHSDKFERHIIIDLKGELDMRNIQVRGLKQMKRVGDANVKSED----------GVVKAHLLVGVHD-------------DVVSMEYDLAYKLGDL---------------------------------------------------------------------------------------------------------------HPNTHVISDIQDFVVELSLEVSE-EGNMTLTSFEVRQANVVNHIGGLSILDPIFAVLSDVLTAIFQDT | |||||||||||||
10 | 6sytA | 0.03 | 0.02 | 0.55 | 0.67 | DEthreader | PSFHFCLACCQLVHS-GT-------------------RIRQAFGKLL-SI-------------DVVLSNNNHTEIQEISLALRSHMSKAPSNTFHPQDFLRLFYSCQRLD-----------------------------------KTIPRNLLKAVLWQWAIWAGNNQLRLV--------------------------------IPLSTLTVSSLPVTL----------------------------LSTEDCLIPLFSEAL-S--------KQHDVPWAHMEKWKAEQAPEVAKSWASTDDMIVMATLRLRLVKHAGPEVRAMMQDCYS-I---L---------M-LQV-MLVAELRVTPHEKWFQDYGDAINGGGGGGGGGGGYITILPKWVATPV-SYARSTAVM-----------------------------------------VLSQV-HI--R-------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |