>PF10350 (252 residues) LVSETFETCMSVSSAVGGVVSSSSPEGHLPMDMTLQLTDHGNSGNVTLDDGRQVTAQMVL LCAWRSVKEVSLLLGGMCGRLSVRGEGGQAGTLSEGQLLRAGEHFTRLLADTKHRGAFEQ AYVGFTMLLDRLWRCRSLPLHVLPRAWLRELLRAVADDAHSLCATRRSAGLPFMIQALVS TEVQVQGNPLCFHECMSCLVSLCACGSARARGHALHVLRALVRHAALAQRVAPYVAPALL AALQAFDANTWA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LVSETFETCMSVSSAVGGVVSSSSPEGHLPMDMTLQLTDHGNSGNVTLDDGRQVTAQMVLLCAWRSVKEVSLLLGGMCGRLSVRGEGGQAGTLSEGQLLRAGEHFTRLLADTKHRGAFEQAYVGFTMLLDRLWRCRSLPLHVLPRAWLRELLRAVADDAHSLCATRRSAGLPFMIQALVSTEVQVQGNPLCFHECMSCLVSLCACGSARARGHALHVLRALVRHAALAQRVAPYVAPALLAALQAFDANTWA | |||||||||||||||||||
1 | 5dlqB | 0.12 | 0.10 | 0.83 | 1.00 | DEthreader | RLSAVLRVSEVESRAIRADLTH------L-----------------------------L---SPQMGKDIVWFLKRWAKYLLVDEKLISTAFGSQWIIGYLLQKVISNLSVWSEQDLANDTVQLLVTLVER-RERA-NLVIQC--ENWWNLAKQFASRSPPLNFLS-SPVQRTLMKALVLGGF-AHMDTKYWTEVLQPLQQRFLRVEVQEITATLEALCGIAEATQNVAILFNFLMDFLNNCIGLMEVYTET | |||||||||||||
2 | 5dlqB | 0.10 | 0.08 | 0.82 | 1.00 | DEthreader | RLSAVLRVSEVESRAIRDLT--------H-----------------------------L--LSPQMGKDIVWFLKRWAKTYLLVDEILSTAFGSQWIIGYLLQKVISNLSVWSSQDLANDTVQLLVTLVER-RERA-NLVIQC--ENWWNLAKQFASRS-PPLNFLSSPVQRTLMKALVLGGF-AHMDTKYWTEVLQPLQQRFRVEVKQEITATLEALCGIAEATQNVAILFNFLMDFLNNCIGLMVYTETV | |||||||||||||
3 | 5t8vA | 0.10 | 0.08 | 0.82 | 1.00 | DEthreader | YSEAIEQALSLCKRLIDGIIMPLAELRN------------EELFKA-L---SSCK-RRILPLM-TDAQKLLSMMSELIAK----------VDTSETVTNALEFAASQLLFIETFDGFRLVAMDMICQIFL-L-------NPSQRQGIIDEILTSLEKLPL-GKRARTFQPVSALIMRLVQTSALLETARNNASYVIKFIVAPYRN-L--LDLFVEDFITCLDNDWPAAELLLRLLMMLLGTMAKKSQ----- | |||||||||||||
4 | 5yz0A | 0.03 | 0.03 | 0.80 | 1.00 | DEthreader | GEHGLELASMIPALRELGSA-T----P-----------------------------EEYNTVVQKPRQILCQFIDRIL-TD--V-----NVAVELVKKTDSQPTSVMLLDFIHIMKSSPLMFVNVSGSHEAK-GSCIE-FSNWIITRLLRIAATPHKKICEVIC--SLLFLFKSKSPAIGVLTKELLQLFEDLVYLHRRNVMGHA----VEWPVVMSRFLSQLD-EHMGYLQSLQLMSMQNLEFIETLLMVR | |||||||||||||
5 | 5t8vA | 0.11 | 0.09 | 0.85 | 1.00 | DEthreader | SENAIEQALSLCKRLIDGIIMPLAELRNT-DT-EEL-----FKALS------SCK-RRI-LPLMTDAQKLLSMMSELIAKV----------DTSETVTNALEFAASQLLFIETFDGFRLVAMDMICQIFLLNP-------SQ-RQGIIDEILTSLEKLPLGKRARTFIQPVSALIMRLVQTSAGPLETRNNASYVIKFIVALPYRNL--LDLFVEDFITCLDNWPAAELLLRLLMLMALLGTMCAAKS---- | |||||||||||||
6 | 4xriA2 | 0.11 | 0.10 | 0.89 | 0.42 | HHpred | ---PLTPHFNQSVTNLLTVTAPMNGDSTAANDSLSAVASLTQEETLPLQQQVVSVED--KLILEDMQTSLCTVLQATVQRLDK-------EI--APQGDRIMQVLLQILSTGGKSSVPEGVFAAISALANAMEEE----FAKYMEAFAPFLYNALGNQE-EPSLCSMAIGLVSDVTRSLG---ER--SQPYCDNFMNYLLGNLRSTTNQFKPAILQCFGDIA--SAIGGHFETYLTIVAQVLQQAATITAG- | |||||||||||||
7 | 5vchA2 | 0.11 | 0.08 | 0.70 | 0.71 | DisCoVER | -IADLVKLALQIA--V---N---------------------------------------SDVDEDIRVFAVQFVTSALVYRK-------SKINAK-LGPEITLAALKVASEEIN-TPALTALRLISNASGELP-----SQ--VGVPIIE-HLPTLS----SSNPFERR-SILLAISVLVTGSPDY-----TLSQIIPATVTGLKDSEAVVQLAALKCIVQLS--TNLQDEVARYHEQYLPLVIDIIVIYYA- | |||||||||||||
8 | 1u6gC | 0.13 | 0.11 | 0.85 | 0.32 | MRFsearch | --GLLVNFHPSILTCLLPQLTSP---------------------------RLAVRKRTIIALGHLVMSCFVDLIEHLLSELSKNDSMSTTRTYAGHRIGEYLEKIIPLVVKFCDDELREYCIQAFESFVRRC----PKEVYPHVSTIINICLKYLTYD--MSWKVRRAA--AKCLDAVVSTRHE--MLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTTPLTMLQSQVPNIVKALHKQMKEKSVK | |||||||||||||
9 | 3m1iC2 | 0.06 | 0.06 | 0.94 | 0.78 | SPARKS-K | TVKIIANIIKTNVAVCTSMGADFYPQLNMLQLYRAVSSMISAQVAAEGLIATKTP---KVRGLRTIKKEILKLVETYISKA------RNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKDFTEY-----RVEFYKLLKVINEKSFALELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERNEFHKNYFFIFVSETFFVLTDSDHK | |||||||||||||
10 | 6xteA | 0.09 | 0.09 | 0.93 | 0.71 | MAPalign | -KYLRPHLEATLQLSLKLCGDLNNMQRALEVIVTLSETPQMLAMMVDLDFDSNAAGESALDRMPRVRYAACNAVGQMATDFAPG--------FQKKFHEKVIAALLQTMEDQGNQRVQAHAAAALINFTEDCPK---SLLIPYLDNLVKHLHSIMLELIQKGTKLVLE-QVVTSIASVADTAEEK--FVPYYDLFMPSLKHIVEAVLRLLRGKTIECISLIGLA--VKEKFMQDASDVMQLLLKTQTDFPQ- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |