Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | DYPLPLIHIPGLKPGQPARQSAMSLRTNFVIAEEYRGKKSTRHIKVNIIPPRTLESDASQEGGFAIDVRRTIGPIKSFSDMRIDINTALPTRITWGGPCYQPAIQDMMMVIESFTKPQVDPSERVGFWDKIRLNFHSRIHIAWRGDGDLHLALKGTRDPYC |
1 | 2bbdA1 | 0.08 | 0.06 | 0.73 | 0.68 | DisCoVER | | NNFIRKIRVQLIG-------SISNSGTAAVTLPSAP---FPYNLVQTFNLS----YEGSKTLYSVSGTGIAYPAPGTSVPASGSVNLNVWEFDLARF-PA--TVQNIILSILTG---QA------------P-----SG-VSINASFYITITYER------ |
2 | 4c3oA | 0.05 | 0.04 | 0.88 | 0.83 | DEthreader | | --------TR-EGIAIPDNANRNMQLDHHLHDWMKLPPEALAHAFQIVKIHFVRLNLVSSIIQARCELPVLLIAYW------EFPDNPDYLPRGAPAMEVLARYLIGYEFKEPVDQLLVLKLPASLGRTAARALES--AGTLYFR---FSEARTNAYEALM |
3 | 5cylA | 0.09 | 0.09 | 1.00 | 0.70 | CEthreader | | GKGLPWRVVNELTSGTAKGTVLFARPVSLFLNYKPQASQEAHELVIGGNWSGVGYPGPYGNQPHALDKRVTSFSGSTTSDYLQELVLTVDPGELPAGVTSVSGSATLNLWAVDRLKGEASIGSVLAVPADNYPTGVCRKPYSLIGPASIAIGGGPPPPPIP |
4 | 5l9gA | 0.05 | 0.04 | 0.89 | 0.68 | EigenThreader | | VTWDIIQIGIADKADFPPGSSNYSTLIAWNKKTYGKFPGKRALWNQLALGEFLSTEEGRKAAIAKSVWWEEVDANFAYTFNDAQLGT---DGYAIVKGAAMRFLKEMSKAEYQKDLPNSFATNMKAYDLAKENVAVQ---YSVDPNFWA-----------K |
5 | 5od4A | 0.25 | 0.11 | 0.45 | 0.24 | HHpred | | -----------------HRDPPYERAGNSRIYER-----SLRT-VIDVAPPD----GHQAIANYEIEVRRIPAAGDCFHTARLSTGSRGPATISWD-ASY------------------------------------------------------------- |
6 | 3qbtF | 0.13 | 0.07 | 0.59 | 0.57 | MRFsearch | | --------------------PSLELSRREFVFENVKF-RQLQKEKFQISNN--------GQVPCHFSFIPKLPWLRAEVDISLDVYVSSVTILNSG-----------------------------------EDKIEDILVLHLDRGKDYFLTISGNYLP-- |
7 | 5cl2A | 0.17 | 0.16 | 0.93 | 0.39 | FFAS-3D | | ------VHVKGGKIAQDIRYIDLQLSTRYVIVKDDEEHRKYATISFRVTGSFTIQPGEEHQFPFTFTLPLDTPIVEVAVVTDLDIDKSDHDRIFVEAH---PWIENVLEAIENLGFRLNEAQRRLPFVQEFEFVPTSELELIFLDEDGLEIIFEVDRRA-- |
8 | 4n20A | 0.10 | 0.09 | 0.93 | 0.60 | SPARKS-K | | QRYIHILGRRKLYHVVKYTGGSAELLFFVEGLCFPDEGSGLVSIHVSLLEY--MAQDIPLTPIFTDTVIFRIAPWIMTPN-----ILPPVSVFVCCMKDNYLFLKEVKNLVEKTCELKVCFQYLNRGW----IQDEIEFGYIEAPHKGFPVVLDSPRDGNL |
9 | 5cl2A | 0.17 | 0.16 | 0.91 | 0.65 | CNFpred | | ---QGTVHVKGGKIAQDIRYIDLQLSTRYVIVKD--HRKYATIHSFRVTGSFTIQPGEEHQFPFTFTLPLDTPIVEVAVVTDLDIQ-SDHDRIFVEA---HPWIENVLEAIENLGFRL-YFQRRLPFVQEFEFVPLDELELIFLLDDGLEIIFEVDR---- |
10 | 2x2hA1 | 0.05 | 0.04 | 0.81 | 0.83 | DEthreader | | LGFADVVFTTFWTANRVGTG-S-EVTLRQLYTK-DSL-TGTDFGIGHLDYG-G---GV----ECDALF------WGRPVEWNYKLSI-GLDFVWQ-------D--MTVPAMNKTYHPQVL-PMVTQRNIHAYTLCESKEGNADTL-TKFSYIIGLVGSDIY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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