>PF10343 (274 residues) LHPKTADKAAADWIFLMATVNFSLWTNKEYSIEVNYKDKTYTGYYAAAACINKALDAGIP ITDPKFMQNMTVKSVCDIFQGHCKEGALVWALHKERTIAIIEAAKVLLAKFDGSFYNCIA QCGKSAVKLLAMIVENFPSYQDYAEYEGKKISFLRKAQILVAHIYYCFKGKNDIADFYDI DQLVVCDHRVTQVLAFFLAFEYSPGLKQSLKIRPIFEIGEDIVLEMRAISIKSVYDIADR IAELRTENDTDLPKINAIDVGTLLWHYRRDNAEV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | LHPKTADKAAADWIFLMATVNFSLWTNKEYSIEVNYKDKTYTGYYAAAACINKALDAGIPITDPKFMQNMTVKSVCDIFQGHCKEGALVWALHKERTIAIIEAAKVLLAKFDGSFYNCIAQCGKSAVKLLAMIVENFPSYQDYAEYEGKKISFLRKAQILVAHIYYCFKGKNDIADFYDIDQLVVCDHRVTQVLAFFLAFEYSPGLKQSLKIRPIFEIGEDIVLEMRAISIKSVYDIADRIAELRTENDTDLPKINAIDVGTLLWHYRRDNAEV | |||||||||||||||||||
1 | 1xqoA | 0.10 | 0.07 | 0.70 | 1.00 | DEthreader | AVCNKGETVGSRLAMLNALISY-RL----TG----------KG-EEHWEYFGKYFSQLEVIDLCRDF--LK--YIET-SPF-------LKIGVEARKKRALKAC--D---Y---V--PNL---EDLGLTLRQLSHIVG--AR---------REQKTLVFTIKILNYAYMCSRGV-NRVLPFDIPIPVDRVARLTWCAGLIDF----P--P--E--E-----ALRR-YEAVQKIWDAVARETG------------IPPLHLDTLLWLAGRAVLYG | |||||||||||||
2 | 1xqoA | 0.10 | 0.07 | 0.70 | 1.00 | DEthreader | RAVCKGETVGSRLAMLNALISYRLT-----G----------KG-EEHWEYFGKYFSQLEVIDLCRDFL-K---YIET-SPF-------LKIGVEARKKRALKAC---D--Y---V--PNL--ED-LGLTLRQLSHIVG--AR---------REQKTLVFTIKILNYAYMCSRGVNRV-LPFDIPIPVDRVARLTWCAGLIDF---PP--E-----E-----ALRR-YEAVQKIWDAVARETG------------IPPLHLDTLLWLAGRAVLYG | |||||||||||||
3 | 1xg7A | 0.09 | 0.06 | 0.69 | 0.50 | HHpred | -FRHQDPE-MFIKLVIANSLV---------SYQLTGRG-----ED-WWWEFARYFSGREV--------DSIWKAYGEFLPKS----KNNRRLIEAKLNRIRKVEGFLSTLTLKDLEGYYK----NMKMLWKALIKIMGSREDS-----------KTIVFTVKMFGYASRIFS--RFIPYPMEIPPEDLRIKSVTSK--L-----------------TQE---------KPTKFWMKIGQES------------GVPPLHIDSLIWPLLGNADLT | |||||||||||||
4 | 1xqoA | 0.10 | 0.07 | 0.69 | 0.72 | DisCoVER | QYVCVKETVGSRLAMLNALISY--------RLTGK--------GEEHWEYFGKYFSQLEVIDLCRDF----LKYIE--SPFLKI-------GVEARKKRALKAC---------DYV-PNL---EDLGLTLRQLSH--IVGAR---------REQKTLVFTIKILNYAYMCSRGVNRV-LPFIPIPVDYRVARLTWCAGLIDF-------PP-----------EEALYEAVQKIWDAVA------------RETGIPPLHLDTLLGRLFQWRCR- | |||||||||||||
5 | 4unfA | 0.11 | 0.07 | 0.69 | 0.48 | MRFsearch | --PAEERAALLAWVKERLHEEYGDQDPT----------PRRDPMHELISTIEAAYQELRTLGDWDAITLAPTDAVAHAIRRS--------NYPESKAPRIQETLRRIKAAPGGYDLDFLRDL--PVKDALKWLTD-LPGV-----------------GVKTASLVLLFNYARPVF---------PVDTHVHRVSTRVGVIP-----------------------------RMGEQAAHRALLALLPPD-----PPYLYELHINFLSHGRQVC-- | |||||||||||||
6 | 5cwcA | 0.12 | 0.08 | 0.68 | 0.74 | SPARKS-K | ------------------------------------SEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAEAGIDSS----EVLELAIRLIKECVENAQREG-YDISEACRAAAEAFKRVAEAAKRAG------ITSS----EVLELAIRLIKECVENAQREGY-----DISEACAAEARVAEAAKRAGITS-SETLKRAIEEIKRVEEGND----ISEACRQAAEEFRKKAEELKRR--------------------------- | |||||||||||||
7 | 1xqoA | 0.11 | 0.08 | 0.69 | 0.97 | MAPalign | NVVRHGETVGSRLAMLNALISYR--------LTGK--------GEEHWEYFGKYFSQLEVIDLCRDF----LKYIETSP-FLKI-------GVEARKKRALKAC---------DYV--P--NLEDLGLTLRQLSHIVGARRE-----------QKTLVFTIKILNYAYMCSRGVRVL-PFDIPIPVDYRVARLTWCAGLIDF---PPEEALR-------------RYEAVQKIWDAVARET------------GIPPLHLDTLLWLAGRAV--- | |||||||||||||
8 | 3fhgA | 0.07 | 0.05 | 0.76 | 0.79 | CEthreader | -----MLRSLVQNPKVRARVLERVDEFRLNNLSNEEVWFRELTLCLLTANSSFISAYQALNCLGQKIYYANEEEIRNILKSCKYR------FYNLKAKYIIMAREKVYGRLKEEIKPLADE---DQQLARERLLN-IKGIGM------------QEASHFLRNVGY--------------FDLAIIDRHIIDFMRRIGAIG--------------ETNVKQLSKSLYISFENILKSIASNLN------------MSVGILDLFIWYKETNTIVK | |||||||||||||
9 | 5cwmA | 0.13 | 0.11 | 0.80 | 0.51 | MUSTER | --------------------------DPEDELKRVEK-----LVKEAEELLRQAKEKGSELEKALRTAEEAAREAKKVLEQAEKEGDPEVRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLEL-------AEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERA----LRVAEEAARL-----AKRVLELAEK-----QGD---PEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKEL | |||||||||||||
10 | 1xqoA | 0.11 | 0.08 | 0.73 | 1.03 | HHsearch | ----AAESQLKRVIETLRRLGIEEVLKRDPQYRASYTGK---G-EEHWEYFGKYFSQLEV--------IDLCRDFLKYIETS----PFLKIGVEARKKRALKACDYVPN------------L-EDLGLTLRQLSHIVGARREQ-----------KTLVFTIKILNYAYMCSG--VNRVLPFDIPPVDYRVARLTWCAGLIDFPPEAL---R--------------RYEAVQKIWDAVARET------------GIPPLHLDTLLWLAGRAVLYG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |