>PF10337 (498 residues) FFRPAWLFDHMDIISFKTVIRSWIGVSLGFMLMMIPAFVRWCGSAPYLLPVVAVIVPAGS QPITVCFIINAIMCLFTCMGYAVMVIAMRINNTWFHNSINAEGMARQMIQEGLCAAPDSN DPNSRATLTACVIDQVYAGKFMTARGSVVYCVLLGAFMFFMLWMKNKSRILIPGYLCGVI AVGALMPLAHMFPYFSPNTIGLTLVKPMGLQFAINVALSILVFPFSSGFQFTQTALSELK ILEGLVKFHENFMTSTLPSNEADWLNFSQTEADVQKARQLYPKLEAEAALLPIELTYSRF AFPDYTALKTSVGRVISGMSGLVYFYDNVENIRRSILLVETAGRPIDMSRKLADSTGNDS RKVDSMLKRRKKDTGRFDIDEKKKPAPVGVYEIKTGIKGAKAQYPDSLTMEELDALMIQL REMSLPFVEQVRLALETMIKWLAAANVYRVNSLFFFWQKKGHRQRQTELAAELAERRQAF KEAAHDFLNSKRFELFQS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FFRPAWLFDHMDIISFKTVIRSWIGVSLGFMLMMIPAFVRWCGSAPYLLPVVAVIVPAGSQPITVCFIINAIMCLFTCMGYAVMVIAMRINNTWFHNSINAEGMARQMIQEGLCAAPDSNDPNSRATLTACVIDQVYAGKFMTARGSVVYCVLLGAFMFFMLWMKNKSRILIPGYLCGVIAVGALMPLAHMFPYFSPNTIGLTLVKPMGLQFAINVALSILVFPFSSGFQFTQTALSELKILEGLVKFHENFMTSTLPSNEADWLNFSQTEADVQKARQLYPKLEAEAALLPIELTYSRFAFPDYTALKTSVGRVISGMSGLVYFYDNVENIRRSILLVETAGRPIDMSRKLADSTGNDSRKVDSMLKRRKKDTGRFDIDEKKKPAPVGVYEIKTGIKGAKAQYPDSLTMEELDALMIQLREMSLPFVEQVRLALETMIKWLAAANVYRVNSLFFFWQKKGHRQRQTELAAELAERRQAFKEAAHDFLNSKRFELFQS | |||||||||||||||||||
1 | 6wg3E | 0.09 | 0.09 | 0.94 | 1.13 | FFAS-3D | ----------LARLDMQRGVREAAVELLGRFVLYYDMLIERILRKRVIKILRDICIEQPTFPKITEMCVKMIRLVNETFQKLWKILNITDVVAACRDTGYD--WFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYGRLVACITTLFLFSAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFTIEEDLMKLIVVQHCVSCLGAVVNKVTQNFKFVWACFNRYYGAISKLKSQHQEDFDLEDFKGNSKVNIKDKVLELLMYFTKAIIGLGFAFIQ----------HPSLMQEVKNLYNNILLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQ---VLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQRNKADQQLVEIDKKYAGFIHMKVAGMKMSYQVQQAINSALCSHLYS--MIRGNRQHRRAFLISLLNLFDDIADNLACFPYQTQEEPL-- | |||||||||||||
2 | 4fgvA | 0.07 | 0.06 | 0.81 | 1.17 | CNFpred | -------------QLYKTIRECLVYLTHLDVVDMEQIMTEKLAR-VLCWAIGSISMAMNEETEKRFLVTVIKDLLGLTVASNIMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHE---------SHEGVQDMACDTFIKIAKQCRRHFVALEPFIEEIIRNIGKITCDLTPQQVHTFYEACGYMVSAQGN-----NQQERLLAELMAIPNAAWIGNIMKTNVSACSSIGPYFFPQIGRLYNDMLQMYAATSQLISEAVGEIATKMPKVRGLRTIKKEILKLVETFVEKAEDL--QAVRSQMIPGLLDSVLVDYNRNVRDAEVLKAMTVIITRLQGL---------------------------------------------------------MEDQVPAI--------MENVFECTLDMINKDYPEHRVEFFNLLRAINYCFPALLDNRQFKFVIDSCMWASKHNRDVETAGLNMCLELINNIAEKTDVQTCNAFFNQ | |||||||||||||
3 | 6h7dA1 | 0.06 | 0.02 | 0.37 | 0.71 | DisCoVER | --------------------------------VTAFVIMTCIVAAMGGLLFGY-DLGISGGVMEEFLLFTSSLYLAALVASFMASVIT-----------------------------------------RKHG--RK------------V--SMFIGGLAFLIGALFNLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAIT-IGILVA---NINYGT-------------------------------------------------------------SQHGWRVSLGL---------------------------------------------------------------------------------------AAVPAVVMVIGSFILPDTPNS--------------ML-ERGKNEEAK---------------------------------------------------------MLKKIR- | |||||||||||||
4 | 6vr4A | 0.07 | 0.05 | 0.66 | 0.67 | DEthreader | ----E--EG--S--K--ELI-KD-ELEDVTQEGLN---EG-LQGGDLVQAFEKNSKD---S-DSSNNESTIYWNFARPSYISNPATYTNNH-FDVAVLENI--QAWITPKRWAFLISRGWNSKYQVYIAAQPLKYSQAVLSIVDGVKLTLSNAD-WKL----------------------QQDL-PV----------------------------------------------------------------SQIQKIYFAINDTVSASNLSIAGLSSELGDRKLYDLERLSAINLL----KLPEAPGIKDKLYNIVFSKI-NSAAVK-LK--TNGGSFI--N---------LVEPSEKDADG-----KTLSSIDPKALRAIGYRIPNQG---N---IGDTIVAYTEIKTGSYVYIG-TANVDVQLSRFTNGSGKNILDGGKFYKEVYKAPFPIFGISSFLNGFEKQFINNSDSNI----------------------- | |||||||||||||
5 | 5y50A | 0.06 | 0.05 | 0.87 | 0.61 | CEthreader | --------------------------------DGFLRETKKLSYIAGAMIAVNSSMYVLQVISIMMVGHGELFLSSTAIAVSFCSVTGFSVVFGLASA-----LETLCGQANGAKQ------------YEKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILSLIGQDAMVAQEAGKFATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCWLGSLGAAIAIGVSYWLNVTVLGLYMTFSSSCSKATISMSLFEGMGEFFRFGIPSASMICLEWWSFEFLVLLSGILPNPKLEASVLSVCLSTQSSLYQIPESLGAAASTRVANELGAG----------------NPKQARMAVYTAMVITGVESIMVGAIVFGARNVFGYLFSSETEVVDYVKSMAPLLSLSVIFDALHAALSGVARGSGRQDIGAYVNLAAYYLFGIPTAILLAFGFKM-RGRGLWIGITVGSCVQAVLLGLIVILTNWKKQARK | |||||||||||||
6 | 6bfiA | 0.05 | 0.04 | 0.96 | 0.78 | EigenThreader | LDGARGVINGMSDLLMCADRSEVRKMVKVCRSVQEYLDVAKVIDVSMMKVVEQRHPELTNLAHAQMLKSELGTVREQIPILISSIRVCCLVIVKDSGEASAASLAHMFHQAQDALASGDISRSTLDAVRKCISEGRRVAALAATQKAKEFEAHTARLADTAELVASSGGCLRKEAAKLRDISTVPAARVVLENPGNQAAKDYLRTVKEKWLEAAESMGRSVDGVIDSLEFMKVSEARIQADVKEAKRIALA------------EEDSMKLIAKASSVARQANRVIQVAKVEADN----SENPEFVAKLSSASESLAKSSADKVVEGVAAVRSVIEDNWVPPRPPLPEEMLRAPLPPKDQNPIHHAAASVFREADQWDEKGNDLISLVKQMARKMAMMSKYTRGESRLNAQELLKLARQIANAAKTNLLQLLDTISTQLKILATVKATSMG--GGDARADADATDMLVGNAENLMRTVKDVIRASEAACIRLRPDASIL | |||||||||||||
7 | 4mt1A | 0.12 | 0.09 | 0.75 | 0.35 | HHpred | ----------GNAMATAKAVKERLAVLEKYFPKSIEKVIHTLIEAMVLVFVVMYLFLQN--IR-----YTLIPTIVVPISLLGGFAFISYMG----MSI------------------------N---V----------------L--TMFAMILVIGIVVVEVERIMAGQISGAVIGITAVLISV--FVPLFSGAAGN-IYKQFALTMASSIAFSAFLALTLTPALCATGFFGWFNKKFDSWTHGYEGRVGVFMRLLPTEDQGLATKERTDATLAQVTQLAGKLTGMMGDGFLSINLQDRNNTGHTALLAKRNELIQKMRASGDPADIRTALASALSSSDFPGRRDEDARMQPANKSGVASTATVSWENGTEQSVRFYPSLSASPAGVSTGQAMEAVQMVEGGFEWGGQSSEE-------AKGGSQTLILYGLAVAAVFLVLAALYESW------------------------------------------------- | |||||||||||||
8 | 6f2gA | 0.11 | 0.08 | 0.74 | 0.43 | MRFsearch | ----------------ITALTVVVGTVIGAGIFFKPTAVYGAAGAPLAWFVAGIITIAGGGGMMIYLEKVYGRWLGFLVGWAQMVIYYPANIA------ALAIIFATQFVNLFA-------------------------LSDSTIVPTAILTSIFLMGVNFLGTKYSGWIQTLATILKLIPLVVIIVAGLLYTHPVLTSFGSALIATLFAYDGWINVGTLAGEMKNPGKMLPKVIIGGLSIVMAVYLLTNIAYLFVL--------DSSQLAGTDTPAALVASHLFE-----------------GIGSKLVTIGILISVFGGINGYIISGLRVPYALATQK-------------------------------------------------MLPFSDWFARINPKTNLPINGGLVMLGIAIVMILLIVFVIWFFITLTFIAVIILRKTQPDIERPYRVPFYPVIPLIAIIGGLFIGILLTLIGIPIYFYCKKKY------ | |||||||||||||
9 | 2r02A | 0.09 | 0.08 | 0.92 | 1.13 | FFAS-3D | -----WKLASLGYEKSCVLFN--CAALASQIAAELKIAAKHYQFASGAFLHITVLSALSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATR----DKMKDAIIAKLANQAA--------------DYFGDAFKQCQYKDTLPPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIARLQHAAELIKTVASRYDEYVNVKDFSDKINRALVPVSVQQSLAAY---NQRKADLVNRSIAQMREATTLANGVLAAIEDVSGDTVPQSQLIKELPELLQRNREILDESLRLLDEEEATDNDLRASNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVCKPEPELNAAIPSANPAKTMQGSEVVNVLKSLLSNLDE---------VKKEREGLENDLKSVNFDDGVINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQV-SHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFELTE- | |||||||||||||
10 | 6r9tA | 0.10 | 0.10 | 1.00 | 0.88 | SPARKS-K | VSQQLAPREGISQEALHTQMLTAVQEISHLIEPLANAARAEASQLGHKVSQMAQYFPLTLAAVGAASHPQQMALLDQTKTLAESALQLLYTAKEAGPKQAATEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGSFVDYQTTMVRTAKAIAVTVQEMVTKSNTSGPLANQLTSDYGRLASEAKPAAVAAENEEIGSHIKHRVQELGHGCAALVTKAGALQCTKKELIECARRVSEKVSHVLAALQAFATAGTLNREGTETFAKVLVEDTKVLVQSVATITRLADVVKLGASLGAEDPETQVVLINAVKDVAKALGDLISATKAVWQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRRQELAVFCSPEPPAKTSTNSCRQEDVANLSRRAIADMLRAAYHPEVAPDVRLRALHYGRECANGYLELLDHVLLTLQRVAGSVTELIQAAEAMKGTEWDPEDPTVIAENELLGAAAAIEAAAKKLEQLKEEQILEA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |