Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | IFLACLAANALEHTPPLGFFRQFVLATHGEHEDTLDLKHDGLVPIIDLARLHALAHGVPAVNTRRRLRQLAEQGALNDGDAADLQDAFAFIAQIRLRHQVRQIADGEAPDNYVSPDALSAFDRRHLKDAFRIVKTAQAAVEQRY |
1 | 1v4aA | 0.14 | 0.12 | 0.85 | 1.17 | DEthreader | | SVIQSLRN-KGIARVRRRG----LT---------DNIKLGGIREIEFIVQVFQLIRELQSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSIND----EQTQTLPSERAWPQLTGALTAH-TNVRRVFNELIG-- |
2 | 1v4aA | 0.15 | 0.12 | 0.86 | 1.17 | DEthreader | | SVIQSLRN-KGIAREVRRRG---LT---------DNIKLGGIREIEFIVQVFQLIRGLQSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSIND----EQTQTLPSERAWPQLTGALTAH-TNVRRVFNELIG-- |
3 | 3k7dA | 0.15 | 0.13 | 0.89 | 1.25 | HHpred | | HFD-AVRREIMTLPREGEMREKMRAHLGNKHRDRFDIKAGGITDIEFITQYLVLRYAHEWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPG------HVSED--------CFTAERELVRASWQKWLVE- |
4 | 1v4aA1 | 0.15 | 0.13 | 0.86 | 1.00 | DisCoVER | | VFRRYIIQSLRNKGEVRR------------RGLTDNIKLGGIREIEFIVQVFQLIRSLQSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSI----NDEQTQTLPSDLAWPQLTGALTAHT-NVRRVFNELI--- |
5 | 1v4aA | 0.16 | 0.15 | 0.92 | 0.82 | MRFsearch | | --DFSVIQSLRNK---------GIAREVRRRGLTDNIKLGGIREIEFIVQVFQLIRGGRSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSINDEQTQLPSDELNRARLAFADWPQLTGALTAHTNVRRVFNELI |
6 | 6yx5B2 | 0.13 | 0.11 | 0.83 | 1.10 | SPARKS-K | | SAKKFYNKAIKDFTAP------------KEGAEVVSVKTHIMRPIDFMLMGLREEFNLYSLSAPGTIRLLREKNLLPEEQIARIESVYNQAMSKRFELHAEHKKE----HDEMPY--------SDAKAMLDEVAKIRELGVQRV |
7 | 3k7dA3 | 0.16 | 0.13 | 0.82 | 1.11 | MAPalign | | -LQTEVREMREKM-------RAHLGN---KHRDRFDIKADGITDIEFITQYLVLRYKLTWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLAL------QELPGHVSE--------DCFTAERELVRASWQKWLVE- |
8 | 3k7dA3 | 0.14 | 0.12 | 0.87 | 1.00 | CEthreader | | REGKTLQTEVREMREKMRAH----LGNKHRDRFDIKADEGGITDIEFITQYLVLRYAHEKPDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQE------LPGHVSEDCF--------TAERELVRASWQKWLVE- |
9 | 1v4aA | 0.16 | 0.15 | 0.94 | 0.79 | MUSTER | | YIDFSVIQSLRNKG---------IAREVRRRGLTDNIKLGGIREIEFIVQVFQLIRGLQSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSINDEQTQTPSDELNRARLAWADWPQLTGALTAHTNVRRVFNELI |
10 | 3k7dA | 0.16 | 0.14 | 0.89 | 2.09 | HHsearch | | HFDA-VRREIMTLPREGEMREKMRAHLGNKHRDRFDIKAGGITDIEFITQYLVLRYAHEWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPG------HVSED--------CFTAERELVRASWQKWLVE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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