>PF10324 (320 residues) KYILAIFGVVINSFHLFILTRKSMRSNCINLLMIAVSICDIYNMMYIVHELNFVFDSKPP ESYFQVFLNHIMNILNGLLRRLSSWLGILMAAIRYFAIKYPMSPTIDVISRPLFAGKSTF LTLLISALVSFLYWVHFSVQPVFLWKPVEELVHLICLEIILNLCRCGFIDNYTVAIYGAE LSEFIQEYPSILGICQSADGLSQVIPAVTLPVLTFLLIKQLDITEKNRSNFLKSQKNNEN SKTDTTKMIMMMTIASTLAEGPIGVLPIVEIFACPFLMVISANLMVIFGAVVALNTSTHC FVCCAISSQYRKTVTQVFLW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KYILAIFGVVINSFHLFILTRKSMRSNCINLLMIAVSICDIYNMMYIVHELNFVFDSKPPESYFQVFLNHIMNILNGLLRRLSSWLGILMAAIRYFAIKYPMSPTIDVISRPLFAGKSTFLTLLISALVSFLYWVHFSVQPVFLWKPVEELVHLICLEIILNLCRCGFIDNYTVAIYGAELSEFIQEYPSILGICQSADGLSQVIPAVTLPVLTFLLIKQLDITEKNRSNFLKSQKNNENSKTDTTKMIMMMTIASTLAEGPIGVLPIVEIFACPFLMVISANLMVIFGAVVALNTSTHCFVCCAISSQYRKTVTQVFLW | |||||||||||||||||||
1 | 5zbhA | 0.12 | 0.11 | 0.90 | 1.33 | DEthreader | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTL-M--HWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRG--WRP--NNRHAYVGIAVIWVLAVASSLPFLIYQVMT-D------------EP-FQ------NV-TLD--KDKYVCFD--QF-PSDSHRLSYTTLLLLQYFGPLCFIFICYFKIYIRLKRRNIFEMRIDYDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNF | |||||||||||||
2 | 5zbhA | 0.12 | 0.11 | 0.88 | 1.33 | DEthreader | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMD--HWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRG--WR--PNNRHAYVGIAVIWVLAVASSLPFLIYQ-V--------------------M---TDE--PFQNVKYVCF-DQ--FP--SDSHRLSYTTLLLLQYFGPLCFIFICYFKIYIRLKRRNIFEMRIWAYDNKYRSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNF | |||||||||||||
3 | 5zbhA | 0.12 | 0.11 | 0.89 | 3.56 | HHpred | -GAVIILGVSGNLALIIIIKQKEMR-NVTNILIVNLSFSDLLVAIMCLPFFVYT---LMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWR----PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEP-FQNV---------------TLDA---YKDKYVCFDQ----FPS-DSHRLSYTTLLVLQYFGPLCFIFICYFKIYIR---LKRRNIFEMLRIDYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIATCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNF | |||||||||||||
4 | 4phuA1 | 0.09 | 0.07 | 0.80 | 0.55 | DisCoVER | LYVAFALGFPLNVLAIRGATHARLRLTPSAVYALNLGCSDLLLTVSLPLKAVEALASGAWPAS-LC---PVFAVAHFAPLYAGGGFLAALSAARYLGAAF----------PPCYSWGVCAAIWALVLCHLGVFGLEAPGG----WLDHS-NT-SLGI--NT--------PVNGSPVCLEAWDPAS------AGPARFSLSLLFFLPLAITAFCFVGCLRALARG----------GSLTHRRKLRAAWVAGGALLTLLLCVGPYNASNVA-SFLY---PNLGGSWRKLGLITGAWSVVLNPLVTG--------YL------ | |||||||||||||
5 | 5nddA | 0.14 | 0.13 | 0.89 | 0.17 | MRFsearch | -TIVFVVALPSNGMALWVFLFRTKKKAPAVIYMANLALADLLSVIWFPLKIAYHIHG--NNWIYGEALCNVLIGFFYANMYCSILFLTCLSVQRAWEIVNPMGHS---RKKANIAIGISLAIWLLILLVTIPLYVVKQTIFI----------------PALQITTCHDV------------LPEQLLVGDMFNYFLSLAIGVFLFPAFLTASAYVLMIRALADLEDNNAYIQKYLENSEKKRKRAIKLAVTVAAMYLICFTPSNLLLVVHYFLIKSGQSHVYALYIVALCLSTLNSCIDPFVYYFVSHDFRDHAKNAL-- | |||||||||||||
6 | 4n6hA2 | 0.14 | 0.12 | 0.87 | 1.99 | SPARKS-K | YSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGE---LLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA--LDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRD---------------------------GAVVCMLQFPSPS----WYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLL-----SGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRK | |||||||||||||
7 | 4n6hA2 | 0.14 | 0.12 | 0.85 | 0.63 | MAPalign | YSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWP---FGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVK--ALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPR-------------------------------DGAVVCMLQ-FPSPSWYWDTVTKICVFLAFVVPILIITVCYGLMLLRLRSLLSGKEKDRS--------LRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC-- | |||||||||||||
8 | 4n6hA2 | 0.14 | 0.12 | 0.87 | 0.38 | CEthreader | YSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWP---FGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA--LDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDG-------------------------------AVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRS-----LRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRK | |||||||||||||
9 | 4n6hA2 | 0.14 | 0.12 | 0.87 | 1.55 | MUSTER | YSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLM---ETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPV--KALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGA--------VVCMLQFPSP-----------------------SWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSG-----SKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRK | |||||||||||||
10 | 5zbhA | 0.12 | 0.11 | 0.89 | 1.35 | HHsearch | YGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFFVYT---LMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWR----PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPF-QNV-------TLDAYKDKYVC---------------FDQFPS-DSHRLSYTTLLVLQYFGPLCFIFICYFKIYIR---LKRRNIFEMLDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIATCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |