Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | TIGVIGNTIMVLCCAMTKRLRSPCHFLISLTCLIDAFHICGQYPFIYQFFTGCKPYQLIPVTSSQSECYFMLILPIIGYTAGGPLILAMGIDRFIAVTFPTSYRYYQQSSAKYLALQLIFPTFYTSFFLVFGFLERDINEQITCANPLALKGASFQWYNYTCAFIYVAIFFVYFRVYFLLKHSQTSSRFKSVFRSILVTVSFVLLGWATTTIANSSSYSVTDNLDTAHLIQTYAGITVNFAAASNVFVFYSINSEYREAIQKLF |
1 | 4n6hA | 0.12 | 0.12 | 0.97 | 1.50 | DEthreader | | AVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKY---LM--E-TWP-FGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDAVVCMLQFSWDTVTKICVFLFAFVPILIITVCYGLMLLRLRSVRLDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC |
2 | 4rnbA | 0.14 | 0.13 | 0.95 | 4.68 | HHpred | | VVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATVVDITET-------WFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHP------STAKRARNSIVIIWIVSCIIMIPQIVMECSKTTLFTVCDERWGGEPKMYHICFFLVTYMLCLMVLAYLQIFRKLWCRQGIRARRKTARMLMVVLLVFAICYLPISILNVLKRVFGHDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAF |
3 | 3pblA1 | 0.16 | 0.15 | 0.95 | 0.54 | DisCoVER | | LAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVT-----GGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTSCRRVALMITAVWVLAFAVSCPLLGFNTT--GDPTVCSIS-NPD--FVIYSSVVSFLPFGVTVLVYARIYVVLKKV--PLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQ-TCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKI- |
4 | 6me6A2 | 0.13 | 0.13 | 0.97 | 0.15 | MRFsearch | | -VDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPYPLILVAIFY------DGWAFGEEHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGSLEYPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVSFCYLRIWVLVLQARLKPSDLRSFLTMFVVFVIFAICFAPLNCIGLAVAINPQAPQIPEGLFVTSYLLAYFNSCLNPIVYGLLDQNFRREYKRIL |
5 | 3d4sA1 | 0.16 | 0.15 | 0.94 | 2.01 | SPARKS-K | | LAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKM------WTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQCYAEET-----CCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQL--LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR--KEVYILLNWIGYVNSGFNPLIYCRS-PDFRIAFQELL |
6 | 2ziyA | 0.15 | 0.15 | 0.97 | 0.63 | MAPalign | | IIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFLMTISCF------LKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIGAYTLEG-VLCNCSFDYSTTRSNILCMFIGFFGPILIIFFCYFNIVMSVSAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGP--LEWVPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTF |
7 | 3dqbA | 0.14 | 0.13 | 0.97 | 0.38 | CEthreader | | MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSL------HGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMALACAAPPLWSRYIPEGMQCSCGIDTNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSD-FGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTL |
8 | 3pblA1 | 0.15 | 0.15 | 0.97 | 1.68 | MUSTER | | LAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGV-----WNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISN--PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTH-CQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKIL |
9 | 6kp6A | 0.14 | 0.13 | 0.96 | 1.35 | HHsearch | | LVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYVYTIKGY-------WPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFQFKRTVPDNQCFAQFLS-NPAVTFGTAIAAFYVVIMTVLYIHIYLASRSRVHAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSC--IPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLL |
10 | 5tgzA1 | 0.12 | 0.12 | 0.97 | 2.52 | FFAS-3D | | TFTVLENLLVLCVILHSRSLRCPSYHFIGSLAVADLLGSVIFVYSFIDF-------HVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAPDQARMDIELAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKLIKTVFAFC-SMLCLLNSTVNPIIYALRSKDLRHAFRSMF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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