>PF10292 (331 residues) ETNCQQMAQVATSSNLRITLFVSLICCLLCIPVNLYALYRIHISVKLHFNSKCVLFTHNF FVLIHCVARIGLHGKDLINYFDSWNSGCDIIPSRSRCDIRIFYKFSEYIIEISPFILTIE RFVATFQAYHYENRYKWFGIVLNILHLSLGSLFLYIQNSTNTGEVIIYYCWLANTGNRFL VNVPTFFIFFSQLATIPGLLYLLRKNEWNLQKFREASLQKHCTLTERYQISENLRTSSMF RIMSIVTWIFVVYNAGGAYIAHFYMGSMEFADQFALVEIIHAIPIYYIILSILIIRVDKK PQSEFTIRVNTYQPHYFIELQKFFDEAFEKI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ETNCQQMAQVATSSNLRITLFVSLICCLLCIPVNLYALYRIHISVKLHFNSKCVLFTHNFFVLIHCVARIGLHGKDLINYFDSWNSGCDIIPSRSRCDIRIFYKFSEYIIEISPFILTIERFVATFQAYHYENRYKWFGIVLNILHLSLGSLFLYIQNSTNTGEVIIYYCWLANTGNRFLVNVPTFFIFFSQLATIPGLLYLLRKNEWNLQKFREASLQKHCTLTERYQISENLRTSSMFRIMSIVTWIFVVYNAGGAYIAHFYMGSMEFADQFALVEIIHAIPIYYIILSILIIRVDKKPQSEFTIRVNTYQPHYFIELQKFFDEAFEKI | |||||||||||||||||||
1 | 6iiuA | 0.07 | 0.06 | 0.89 | 1.17 | DEthreader | PKLKYPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAG-AT-RSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEW--H-A-DPGCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGIRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGR-YTVQWCFLTLGEGDVFGLLFSMLGGLSVGLSFLLNTVSVATLCHVYHGMKKPDFKDD-FEEVEE-RDSEVEMMAQALGIMVVASVCWLPLLVFIAQTVRPAMSQLSRTTEKELLIYLRATWNQILDPWVYILFRRAVLR---------------------------- | |||||||||||||
2 | 2z73A | 0.10 | 0.09 | 0.92 | 1.17 | DEthreader | ETWYNVWRDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGF--PLMTISCFLKK----WIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIRMAASKK-MSHRRAFIMIIFVWLWSVLWAIGPIFGW--GAYTLECSFDISDTRSNILCMFIGFFGPILIIFFCYFNIVMSVSNHEKEMAAMARNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQGPLEWVT-PYAAQLPVMFA-KA-SAIHNPMIYSVSHPKDDKEEDKDAETEIPAGE-------------- | |||||||||||||
3 | 4n6hA | 0.09 | 0.08 | 0.87 | 1.07 | HHpred | -----GARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATS-TLPFQSAKY---LM-E----TWPFGELLCKVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFTPAKAKLINICIWVLASGVGVMVMAVTRPRDGAVVCMLQFPSPSWYTVTKICVFLFAFVVPILIITVCYGLM---LLRLRSVR-LLSG---SKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIAGYANSSLNPVLYAFLDENFKRCFRQLCR--------------------- | |||||||||||||
4 | 6iiuA2 | 0.07 | 0.06 | 0.79 | 0.59 | DisCoVER | RPTNEERRLIA-----S--PWFAASFCVVGLASNLLALSVLAGA--TRSSFLTFLCGLVLTDFLGLLVTG--T-IVVSQHA-----ALFEWVCRFMG---VVMIFFGLSPLLLGAAMASERYLGITRPFSPAVASQRRAWATVGLVWAAALALGLLPLGVGRYTVQYPGFLTLGAGDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCH----------------VYHEERDSEVEMMAQALGIMVVASVCWLPLLVFIAQTVLPAMGQLSRTTEKELLIYLVATWNQILDPWVYILFRR-------------------------------- | |||||||||||||
5 | 2pedA | 0.11 | 0.10 | 0.88 | 0.20 | MRFsearch | ---EAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGY--------FVFGPTGCNLEFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSPEGMQCSCGIDYYEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQ------QESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQG--SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNK---------------QFRNCMVTTLCC----- | |||||||||||||
6 | 4n6hA2 | 0.09 | 0.08 | 0.89 | 1.40 | SPARKS-K | ---SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST----LPFQSAKYLMETWPF----GELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGS-------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLD-------------------ENFKRCFRQLCRKP | |||||||||||||
7 | 2z73A | 0.08 | 0.08 | 0.97 | 0.66 | MAPalign | VHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNG--FPLMTISCF----LKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRMAASKKMSHRRAFIMIIFVWLWSVLWAGAYTLEGVLCNCSFDYISRDSTTRSNILCMFIGFFGPILIIFFCYFNIVSNHEKEMAAMAKRLNAKEL-RKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKA--SAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAE- | |||||||||||||
8 | 4n6hA2 | 0.09 | 0.08 | 0.89 | 0.38 | CEthreader | ---SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGE--------LLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRPAKAKLINICIWVLASGVGVPIMVMAVDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGS-------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG----------------- | |||||||||||||
9 | 4n6hA2 | 0.10 | 0.09 | 0.90 | 1.09 | MUSTER | SPG---ARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGE--------LLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRAVVCMLQFPSPSWYWDTVTKICVFLFAF-VVPILIITVCYGLMLLRLRSVRLLSGS----KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG----------------- | |||||||||||||
10 | 6kp6A | 0.10 | 0.09 | 0.85 | 1.08 | HHsearch | ------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYT---IK-G----YWPLGAVVCDWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARTTKMAALMIAAAWVLSFVLWAWQFVVGKRTVPDNQCFAQFLSNPAVTFGTA--IAAFYLPVVIMTVLYIHIYL----ASRSRVHGSPRSLSFSQMAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCIPDTVW----SIGYWCYVNSTIRPACYALCNAEFKKTFRHLCQ--------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |