Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | PLCADPFSPEIEQLCQALVREAQDDKTLCFENFTKPCPQLTKKQVELCKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKAGMLGAAESHKIMADTDHHQTGGMYLRINQNGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEMESGRCFRIERRAFERNGLMIMRQATEVAGKISFVFYVKVSNDPESKPIPLQSRDYTALAGLDNVPDSLGNPYTCEAKDLDYPIKRDTWLDKNQEEMLKQRSIVGTAF |
1 | 1vprA | 0.84 | 0.77 | 0.91 | 15.00 | HHpred | | PLCEDPYGSEVQA-TEKLLKEADSDRTLCFNNFQDPCPQLTKEQVA-CKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAEANKIVADTDHHQTGG-YLRINQFGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWE-ESGRCFRIERRAFPVGPYTF-RQATEVGGKISFVFYVKVSNDPESDPIPLQSRDYTALAGRDNAPTNLGKPYPTLAKDLDYPKKRD--------------------- |
2 | 1vprA | 0.82 | 0.75 | 0.91 | 2.45 | MRFsearch | | PLCEDPYGSEVQA-TEKLLKEADSDRTLCFNNFQDPCPQLTKEQVA-CKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAEANKIVADTDHHQTG-GYLRINQFGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEES-GRCFRIERRAFPVGPYTFRQ-ATEVGGKISFVFYVKVSNDPESDPIPLQSRDYTALAGRDNAPTNLGKPYPTLAKDLDYPKKRD--------------------- |
3 | 1vprA | 0.84 | 0.77 | 0.91 | 3.32 | SPARKS-K | | PLCEDPYGSEVQAT-EKLLKEADSDRTLCFNNFQDPCPQLTKEQVA-CKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAEANKIVADTDHHQTGG-YLRINQFGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWE-ESGRCFRIERRAFPVGPYTF-RQATEVGGKISFVFYVKVSNDPESDPIPLQSRDYTALAGRDNAPTNLGKPYPTLAKDLDYPKKRD--------------------- |
4 | 1vt4I3 | 0.09 | 0.08 | 0.96 | 1.13 | MAPalign | | PPYLDQYFYSHIGHHLRMTLFRMVFLDFRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGG-----GGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
5 | 1vprA | 0.83 | 0.75 | 0.91 | 1.81 | MUSTER | | PLCEDPYG-SEVQATEKLLKEADSDRTLCFNNFQDPCPQLTKEQVAC-KGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAEANKIVADTDHHQTGG-YLRINQFGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWE--SGRCFRIERRAFPVGPYTFRQA-TEVGGKISFVFYVKVSNDPESDPIPLQSRDYTALAGRDNAPTNLGKPYPTLAKDLDYPKKRD--------------------- |
6 | 1vprA | 0.84 | 0.77 | 0.91 | 2.98 | FFAS-3D | | PLCEDPYGSEVQA-TEKLLKEADSDRTLCFNNFQDPCPQLTKEQVA-CKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAEANKIVADTDHHQTGG-YLRINQFGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWE-ESGRCFRIERRAFPVGPYTF-RQATEVGGKISFVFYVKVSNDPESDPIPLQSRDYTALAGRDNAPTNLGKPYPTLAKDLDYPKKRD--------------------- |
7 | 4j7rA | 0.05 | 0.03 | 0.74 | 0.67 | DEthreader | | FSAESVPDPYDRVEGVHQEEDK-YPG-RH--MTW--AHVRGFTAVAAPGM-ERDYL---------VFEFNELQYRFNFWGYSTYLDVVFN----M---YNYSGCGN-TLNCNQRLTLAD-------E-IS-D-L---MIAEANQVGNGKFDVNTDGPAGDFASAGPSINALLLSCGTFVNDIQWHPDWTDT---SRLVAFTLHDGKGGLYVAFNTSHL----L-L-K-------WGGRVWQPLVD--TSKV------------APYDFLLADVAARRQAAATSMI-K--------- |
8 | 6lodB | 0.06 | 0.05 | 0.80 | 0.83 | DEthreader | | APTTWDFVAAATAAMQQTQGARFPQAKWYEYEGRDANAGARLAFTIVGFDADFTA---TGV---VGESQPPVVHAH-PVEDD---GIAALSALTQEMNGVEVLLMIES--NPVYNA-PA----DIPFA--VGHFAKSA----------IVFRPD-PSLWDGAFANN--AWLQETPKPYTKLTWDNFG------G-VG--ASTQGHFLSCNVVACQS--NIPVMHIRIDQYYV-YNMVMLC------VYVRRFNFYVPIDRGVMEKTFCVQRIMTQIVFGVTKPRVS---------- |
9 | 4a7kA2 | 0.06 | 0.04 | 0.77 | 0.61 | DisCoVER | | ----------------GILAERLDEEMLRVVRAGSTRFKT------EMEFL-D----V-AGKKLTLV---VLPPFARLDVERNVSGVAGTVCWAKHERVPATRPFGCESM-------------IVSADYLESGEEGAILVLYKPSSTSAHNLFPAVFNLIGFHVNFADAAVLAHVQL-WTAGIGVSAGFASFCEIHACIANG-TGRGGMRWATVPDSPNLEDTELIVVP-D--MHEHGPLRPDGHPWHAWLAGAAFDVWVAFE-FPGFETFSTPPPP------------------- |
10 | 5cw9A | 0.13 | 0.05 | 0.41 | 0.17 | MRFsearch | | -------PEAYYKALREMIRQARKFGTVTVT------------------------------------------------------LIIRFRGDDLEALEKALKE---MIRQARKF--------AGTVTYTLDGNDLEIRITGVILELVKEA----------------------------------------------------------IRLAKEFNITVTVELVIRITG----------------------------------------------VPEQVRKELAKEAERLAKEF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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