Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | HWWMLPLASLIAWYGMLIAMLACWSFQGHPIYWFMDVRQFPVYISDIGATNLKPLFISCAGFQGLAFFLTLCCERYLRAKQKLIPNFNKKEVVSSYLSIFFCAIGELGILFVSIFDTHLFHTVHITMVGIFISFMFFSCFSLIFEYFSLGRNYYRKFNVKKYNYLMLSAITKLIWCIFAMGLAIGFGVCMRKRLRSQSAALEWTLSFWYGVFLMILIFDLYP |
1 | 4a01A | 0.06 | 0.06 | 0.95 | 1.17 | DEthreader | | MGSSMALFGVGGGIYTKAADVGADLVGVERN-IP--------E--DDPRNPAVIADNVGDNVGIAGMGSDLFGSYAESSCAALVVMYGVAALGMLSTIATGLAIDAYGPISDNAGGAEHRERTDALDAA-GNTTAAIGKGFAIGSAALVSLALFGAFVVLSGVLAGSLVSGVQIAISASNTGGAWDNAKYIGGPKHAAVIGDTIGDPLDTSGPSLNILIKLE |
2 | 5zleA | 0.11 | 0.10 | 0.93 | 1.02 | FFAS-3D | | YWRFLALLGSALLVGLSVIFALVWVL---------------HYREGLGWDGSALEFVLMVTGFVFIQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVAAILAIISVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPAFPPEGVFVNTLGLLILVFGALIFWIVTP |
3 | 3rkoC | 0.09 | 0.08 | 0.95 | 1.18 | CNFpred | | LMWILGGVIGVFLAIDMFLFFFFWEMML---------VPMYFLIALWGH-TAATKFFIYTQASGLVMLIAILAL-NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF-DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE |
4 | 4a01A | 0.05 | 0.05 | 0.95 | 1.17 | DEthreader | | GSSMALFGRVGGGIYTKAADVGADL-----VG--K---VERNI-PEDDPRNPVIADNVGDNVGIAGMGSDLFGSYAESS-CAALVMYGVAALGMLSTIATGLAIDAYGPISDNAGGAEMIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAVSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEGRGPKKAAVIGDTIGDPLDTSGPSLNILIKLM |
5 | 2pfmA | 0.07 | 0.06 | 0.89 | 1.17 | DEthreader | | -----TRPEMGAIWTEENKF-IIY-IERHDVV-H-----T-ST-DVVDT----A-LSYILKQANEIILKDLENFVSILANKAKEHFLKGLWYEEMKRNVERFKQAANTVR-V-GKLSGGSTTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQKRVEEAFAPIGSENMTGLARVIRG-YMMTAYENVP-LWHERDISHSSAERVILPDATIALNYMNRFGNI |
6 | 3rkoB | 0.08 | 0.07 | 0.85 | 1.18 | CNFpred | | --AGPTPVSALIHAATMVTAGVYLIAR-------------THGLFLM----TPEVLHLVGIVGAVTLLLAGFAALVQ----------TDIKRVLAYSTMSQIGYMFLALGVQAW-----DAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSAAGFFSKDEILAGAINLMVAGLVGAFMTSLYTFRMIFIVFHGKE |
7 | 3gzhA | 0.09 | 0.08 | 0.90 | 1.17 | DEthreader | | ------GDKVSALRGIFYGLLKRVARIAVEYHCTS------E--DINNL---S--HALMLKTARDEILPYWRQLIDGIKDLAQYITIGKEMANVAYRMERQYRQLNQV-EILGIQWN-PYTTEPHDYIAELFDCVARFNTILIDFDRDVWGYIANFKQKVNPIDFENSEGNLGLSNAVLQHLASKLPVS-RWQRDLTDSTVLRNLGVGIGYALIAYQSTLKG |
8 | 4oo9A | 0.11 | 0.09 | 0.79 | 0.57 | DisCoVER | | ELCYIILAGICLGY-LC-------------TFLIA---------KPKQYC------YLQRIGIGLSPAMSYSALVTKTY--RAARILAYKISAAQLVIAFILICQLGIIALEPDIMVYLICNTTNLGVVAPLGYNGLLILACTFYAFKTR-NVPANF-----NEAKYIAFTMYTTC-IIWLAFVPIYFGS-NYKII-TM------CFSVSLSATVALGCMF- |
9 | 1re5D1 | 0.09 | 0.09 | 0.92 | 1.17 | DEthreader | | --------TAPAMREIFSRGRLQMDTLISAILHGATS--QDAM-DTGLV----LQLR-DALDLIEADLGKLADTLSQQALKHADTPLGMKLAGVLGALTRHRQR-LQELRPRLLVLQFPWHTQRD-RLVEFASVLGLVAGSLGKFGRDISLLMQGEVFPSAGKRNPVGAAVLIGAATRVPGLLSTLFAAMPQSLWHAEWETLPDICCLVSGALRQAQVIAEG |
10 | 4xydA | 0.10 | 0.09 | 0.95 | 0.43 | CEthreader | | TGVDREIIEKWLYLIVATALFSGILGTGHHYFWIGTPGY------------WQWIGSIFSALEVVPFFGMMAFAFVMVWKGRKDHPNKAALLWSLGCATLAFFGAGVWGFLHTLHGINYYTHGTQITAAHGHLAFFGAYVSLNLAIFSYAFPILRKRDPYNQVLNMASFWLMAGGMTFMTFVLTFAGTVQFMDVQDAITIFYWMRFGSGIAVVLGALLFIYA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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