>PF10269 (237 residues) LKLDHHISCSWWIIFLPLWMFHGIVARGRFSLPAPSAPRNRNWAPCHAVVAMPLLIAFEL LLCIYLESLDVRGSAAVDLKIVFLPLLTFEIIILIDNFRMCRALMPGDEENMSDEAIWET LPHFWVAISMVFFIAATVFTLLKLSGDVGALGWWDLFINFVIAECFAFLVCTKCGLVVSS EENQRQGRMCSLQDIGGHFMKVPIIVFQVLLVMHLEGTPACAVYIPLPVLFSPIFLL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LKLDHHISCSWWIIFLPLWMFHGIVARGRFSLPAPSAPRNRNWAPCHAVVAMPLLIAFELLLCIYLESLDVRGSAAVDLKIVFLPLLTFEIIILIDNFRMCRALMPGDEENMSDEAIWETLPHFWVAISMVFFIAATVFTLLKLSGDVGALGWWDLFINFVIAECFAFLVCTKCGLVVSSEENQRQGRMCSLQDIGGHFMKVPIIVFQVLLVMHLEGTPACAVYIPLPVLFSPIFLL | |||||||||||||||||||
1 | 4a01A | 0.07 | 0.06 | 0.85 | 1.00 | DEthreader | -------------------------S---------GFEAITGYGLGGSSMALFGRVGGGIYTKAADVGAV-RNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVASIMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIEIRERDADAAGNTTAAIGKGFAIGSAALVSLALFG-AFVSRASVLASLVSGVQIAISASNTGGAWDNAKKYICHKAVIGTIGPLKTSGSLLI | |||||||||||||
2 | 4or2A2 | 0.07 | 0.07 | 0.97 | 1.02 | FFAS-3D | ----RYLEWSESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILARKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPCNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYITTCFAV----SLSVTVALGCMFTPMYII | |||||||||||||
3 | 3rkoC | 0.09 | 0.08 | 0.92 | 1.19 | CNFpred | ---------FLFFFFWEMMLVPMYFLIALWGHKADGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELL-GVEYLLMLGFFIAFAVKMPVVPL----GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ-----TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL | |||||||||||||
4 | 6qq5A | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | QLGSIAYAYSLVRTWHIQSALFWIATGFLAAGLFLAPRDQKAGVDILFWALVLVVVGSFAGNYLA-IAQ--IMPPDLNFWLGRLWQIGKFAGICFWLVLMLRGIVPARTPGGDKNLLAL--LTASVGAIGLFYGAG-FF--YG-ERTHLTVMEYWRWWIVHLWEGFFEVFATTALFIFSLGLRAWMNLKWPLMCFVAVA-WN--GA--G--IN---SLYYIQGLNTTPVHAHALFLL | |||||||||||||
5 | 4av3A | 0.06 | 0.05 | 0.80 | 1.00 | DEthreader | -----------------------------------VSGALGSIAMFDRVGGGVYTKAADMAADLV--G------K-NP--ATI-ADNVGDNVGVAGLGADLLESFVGAIVSSAAALGMLSFVATSVSVDSYGPIADNAGGISEMCELDPERKTDHLDAVGNTTAAIGKGFAIGSAIFALSAYMGLIGTVLSGAMLAILTANSGGAWDNAKKYLEAGNGYGKHKALIDTVGDPLKTVG | |||||||||||||
6 | 6nwdA | 0.12 | 0.11 | 0.89 | 1.01 | FFAS-3D | ---DSLTYGQFNLVYNAFSFAIAAMFASALFFFSAQALVGQRYRLALLVSAIVVSIAGYHYFRIFNTSEKFNDAYRYVDWLLTVPLLLVETVAVLTLPAKEAR------------------PLLIKLTVASVLMIATGYPGEISDDITTRIIWGTVSTIPFAYILYVLWVELSRSLVRQPAAVQT------LVRNMRWLLLLSWGVYPIAYLLPMLGVSGTSAAVGVQVGYTIADVL | |||||||||||||
7 | 3rkoB | 0.07 | 0.06 | 0.87 | 1.15 | CNFpred | -----------LMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLF------LMTPEVLHLVGIVGAVTLLLAGFAALVQT-----------DIKRVLAYSTMSQIGYMFLALGVQAWDAAIF---HLMTHAFFKALLFLASGSVILACMGGLRKSIPLVYLCFLVGGAALSALPTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTF | |||||||||||||
8 | 3ayfA | 0.09 | 0.08 | 0.91 | 1.00 | DEthreader | GLMTVGPLPFNIAKGYHLQLAFWIATAWLGMGIFIAPQEQGLLVDLLFWALVVLVGGSMIGQWLGV-NG---YLGNEWFLLGRIWQIILVVGMLLWLFIVFRGVKRGLKRESDKGLIHL-L-FYSAIAVPFFYIFA-FFI--Q-P-DTNFTMADFWRWWIHLWVEGIFEVAVVVIGLLVLRLDGFPYKATFWFLISTAIWNL--AG--G---N----SYFEHGQFLTPAHGHAMMGL | |||||||||||||
9 | 4lz6A | 0.09 | 0.08 | 0.86 | 0.91 | DisCoVER | ISAVGIEGVAGVTIAFPIMMIMMSMAGALGIGGASVISLEANQVFGNILTVISVGFISALGLTQGYA---------TDYL-FP-ILLGSIFFF--FA-FAANNIIR----SEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLG---------AS-IA--TVIAQASVTGVYFLTLSLMKGSVIKEVCLVGLPAFVQSSASLMMIAINSMLLRFGSDFYVGVF-GLVQRIMMF-- | |||||||||||||
10 | 6elhA | 0.09 | 0.08 | 0.87 | 1.00 | DEthreader | QMEVGSGAARTWHIQSAIFWIATGFLTAGLFLAPINGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFALTHILPPFNFWFGGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKG-DKNLLAIFVASMVGVGVFYAPG-LF-YG--EKSPIAEYRWWVVHLWVEGFEVFATAAFAFVFYNMG--------------P--CF--V--NGA-FG-NL-IQGLNTSAVAH-LF-GF-ALVAA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |