Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RFSNSFDPIPLDRSMAVQAQTSGKLNAKHRELLELQKQAQARLARTRERFSEGMRDAREVRNDLEWTQKKVSALNAKAARKHPKEY |
1 | 3k5bA | 0.12 | 0.12 | 0.99 | 1.50 | DEthreader | | ILSQEVEAEIQALLQEAEAKAEAVKREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGEVLEEVRRRVREEA- |
2 | 1ciiA | 0.07 | 0.07 | 0.99 | 1.50 | DEthreader | | AVIEWKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAF-R |
3 | 4njlA | 0.07 | 0.07 | 0.94 | 1.33 | DEthreader | | -----TQQVLSENQKLIANKFNQALGAMQTGFTTTNEAFQKVQDAVNNNAQALSKLASELSNTFGAISASIGDIIQRLDVLEQSRG |
4 | 6u0tA | 0.09 | 0.09 | 0.99 | 1.50 | DEthreader | | QIREKKMREEAERNEERAYATQTLELNRMRGMLEDDFNRKKASIRQAVKEENQQLDKQKRDLEKQSNNEKLNYERTEIDMVKTRG- |
5 | 3k5bA | 0.10 | 0.09 | 0.97 | 1.33 | DEthreader | | --IQ-LLQEAEAKAEAVKREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGEVLEEVRRRVREALEALPERLL |
6 | 6f1tX2 | 0.08 | 0.07 | 0.91 | 0.38 | HHpred | | -LESL--QAEIKRKRELEHR-LSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGG---- |
7 | 3cvfC | 0.00 | 0.00 | 0.01 | 0.68 | DisCoVER | | ---------------------------------------------------------------------------------A---- |
8 | 4iloA | 0.07 | 0.07 | 0.93 | 0.35 | MRFsearch | | --QSILAIQELDIKMIRLMRVKKEHQNELAKIQALKTDIRRKVEEKEQEMEKLKDQIKGGEKRIQEISDQINKLENQQAAVK---- |
9 | 5cwcA2 | 0.19 | 0.17 | 0.94 | 0.79 | SPARKS-K | | -----TSSEVLELAIRLIKECVENAQREISEACRAAAEAFKRVAEAAKRAETLKRAIEEIRKRVEEAQREISEACRQAAEEFRKKA |
10 | 2tmaA | 0.07 | 0.07 | 1.00 | 0.50 | MAPalign | | RAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|