Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LYDPDEDDRDQAWVDARRRQYNSRKRPASALRSQHRRPEGLPSSDAILNCPACMTTLCLDCQRHEKYRTQYRAMFVMNCTVKKDEVLRYKTQEDRKQRRRKRRRDQKTDQKTDAPADETPDPMPAGMDADEVYHPVQCSECSTEVAVFDKDEVYHFFNILAS |
1 | 1hxrB | 0.06 | 0.03 | 0.49 | 0.87 | DisCoVER | | ELV------SAEGR-----------------------------NRKAVLCQRCGSRVLGTALFSR-VLEEHWLVNFENVGFT----K-----------------------------------------DVGNVKFLVCADCIGPIGWHCLKNSFYVALVSH- |
2 | 4ayoA | 0.09 | 0.07 | 0.79 | 0.83 | DEthreader | | VEFQWAWQGYVA--W--G----K-DEINPVSGTSRSFIHDLGLSLVEAAQVFETNLVGLLSAH--------LASLLAAYLSDAWALNWLDRDRYRRLAIHYREMATSRGYTACPGYWEQ--YYYFSDTIDYQLQLS------TEANVLRGFRK--------- |
3 | 5j6pB | 0.14 | 0.07 | 0.51 | 1.02 | CEthreader | | -----------------------------------------ESQPSVFQCKKCFQIVGDSNAWVISHRLSFTLSDAVSVRVEDTFKRS--------------------------------------DDGLCVYSELSCTRCNEVIGKVYNSDMYTFSMDKLQ |
4 | 5jajA2 | 0.12 | 0.09 | 0.69 | 0.72 | EigenThreader | | KIVELQRNAVLSWQVKEARSSERRQL--------------HDPDDVYFHCVNCNVAVRGSDIRT-VEAMHHVNIFRFYYTVS---SGKIHF-------------ERTFRD-------------------WEPGCRIVCECRQEWGMEMIYRNVTLILSIKNF |
5 | 5j6pB | 0.16 | 0.08 | 0.51 | 0.38 | HHpred | | -----------------------------------------ESQPSVFQCKKCFQIVGDSNAWVIS-HREYLSFTLSDA-VENSV--RVEDT-----------------------------FKR-SDDGLCVYSELSCTRCNEVIGKVYIRDMYTFS----- |
6 | 5j6pB | 0.14 | 0.06 | 0.43 | 0.63 | MRFsearch | | ------------------------------------------SQPSVFQCKKCFQIVGDSNAWVISH-REYLSFTLSDARVEDTFKRSD--------------------------------------DGLCVYSELSCTRCNEVIGKVYN------------ |
7 | 5jajA2 | 0.14 | 0.10 | 0.73 | 0.47 | FFAS-3D | | -----ERKYRLKIVELQRNAVLSWQVKEARSSERRQLHD---PDDVYFHCVNCNVAVCRGSD---------------IRTVEAMHHVNINPNFRFYYTVSSGKIHFERTFRD-----------------WEPGCRIVCSECRQEWGMIYRNVTLPILSI--- |
8 | 1z6nA | 0.11 | 0.08 | 0.74 | 0.78 | SPARKS-K | | AFVGHGLATEQGAVARFRQKLESNGLPSALTERLQRIERR----YRLLVCPDCQINLAALDFAQRLQPN-IELAIILVLVLDEELLGRFVQAVLDGGPQALAAYKAGDYLEHAIGDVLAIIEGAA------------------------------------- |
9 | 6asyA | 0.10 | 0.07 | 0.65 | 0.91 | CNFpred | | ---------ISAMVLTKMKETAEAYLGKKV-------------THAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGE-----------------------------------KNILVFDLGGGTFDVSLLTIDGVFEVVATNGD |
10 | 5wu1A | 0.05 | 0.04 | 0.83 | 0.83 | DEthreader | | ----G--A-AQGLSLNALTLLVIFLQTR-DPPVINESLLFFS------LR-LGPLAGRLCPSSPS----SLLSATP--SASWR--CALHRVWQGRRRARRRLQQQTKEG--AGGGGATEAQTQ-LKTEPLLSFVASVSPADRMLTVTPLQDPGFPHHQLP-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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