Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | DVVIVITGNPGVPDFYKDFAEQLQAKLPSEVPIWIIGHTGHTKPPDNLPNSYPDTKSARHLYDLKGNLKHKIEFIKQYVPADARIHIIAHSIGSWFTINLLRETEIADRVVKCYLLFPTIERMAESPTGRFLTGIVLRIAAVIIFLSWIFTLLPYLLQAVLIRVFGLFYGIPAHQTGAVLQLVHPIPLKRIFLLAKDEMILVKELDDNLISQHKGKLFLYYGANDGWTPIRYYEDLKAKFPDIDAHLCRRGFQHSFV |
1 | 4inzA | 0.10 | 0.09 | 0.91 | 1.33 | DEthreader | | ELMLFLHGFPDFSHIWRHQIDEFSN--D--FHTVALDLRGYNLSE--KP-------SGLESYEIDVLVEDIRQVIEGLGYS--SCTLVVHDWGAGIGWTFAYR--YPEYVQKLIAFNGPHFRELTNKNQQKASEYAKWFQKEVQDYME-R--D-NFSGLRKVIDPGVKKGLTADDVQAYMNSWENGSVLSMLSYYRNLKIDRSLFPLEEEV-LNIPVQIIWGNQDPTFMPENLDGIEEYVPNISVHRLA-EASHAPQ |
2 | 5dnuA | 0.11 | 0.10 | 0.89 | 1.17 | DEthreader | | TTVVLGHGFGTDQSVW-K---HLVPYLVDSYRVLLYDNMGA-G-ST-NP-EY--F-HFERYSTLQGYAHDLLVILHEFNI--RSCIFVGHSLSAMTGAIASI-I-RPDLFQKIVMLSASPRFLNTAYLGGFEPADVEQLAGAIEANY--K------SWVSGFAPMGDMDSVAVQEFSRTLFNM---RPDIARSVFRTIFTS--DLRD-YLGRVTVPCHIIQSSRDMAVPVSVAGYIHNRVGRSVVEVMNTEGLPQAL |
3 | 3hi4A | 0.12 | 0.11 | 0.87 | 1.01 | HHpred | | KPVLFSHGWPLDADMWEYQMEYLSSR---GYRTIAFDRRGFGRSDQ-----------PWTGNDYDTFADDIAQLIEHLDL--KEVTLVGFSMGGGDVARYIARHS--ARVAGLVLLGAVTPLKPDYPQGVPLDVFARFKT-------ELLKDRAQFISDFN-APFYGIQVVSQGVQTQTLQLASLKATVDCVT----AFA--ETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAELIKGAELKVYK-DAPHGFA |
4 | 5h3hA | 0.12 | 0.11 | 0.85 | 0.57 | DisCoVER | | QPVVMLHGWPANNNMFEYQKNRLLE---EGYRYIGVDYRGYGKS------DAP-----ATGYDYTTMASDIN-EVIQQ-LKLTNVTLLGFSMGGGIALKYLLNH-GESNVSKLILAGAAAPVFTQY-GM--TKDEVDALIEDT-----------KQDRPSMLKGFGFFAKHQQWFHNLSVDA----SSHGTIQSAIALR-DED-LR-DGLPKITVDTLIMHGKKDQVCPFEFAEVMHENIAGSRLEVFEESGHGMF- |
5 | 3kdaA | 0.14 | 0.13 | 0.92 | 0.28 | MRFsearch | | -LVMLVHGFGQTWYEWHQLMPELAK----RFTVIAPDLPGLGQSEPP-----------KTGYSGEQVAVYLHKLARQFSP-DRPFDLVAHDIGIWNTYPMVVKNQ--ADIARLVYMEAPIPDARFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHANTEVFSERLLDLYARSYKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAEDVEGHVLP-GCGHWLP |
6 | 1a8sA | 0.11 | 0.11 | 0.92 | 1.37 | SPARKS-K | | QPIVFSHGWPLNADSWESQMIFLAAQ---GYRVIAHDRRGHGRSSQ-----------PWSGNDMDTYADDLAQLIEHL--DLRDAVLFGFSTGGGEVARYIGRHGT-ARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAA-GHKNAYDCIKAFSETD--FTEDLKKIDVPTLVVHGDADQVVPIEAGIASAALVKGSTLKIYS-GAPHGLT |
7 | 1a8sA | 0.12 | 0.11 | 0.90 | 0.50 | MAPalign | | QPIVFSHGWPLNADSWESQMIFLAAQG---YRVIAHDRRGHGRSSQ-----------PWSGNDMDTYADDLAQLIEHL--DLRDAVLFGFSTGGGEVARYIGRH-GTARVAKAGLISAVPPLMLKTEANPGGL-PMEVFDGIRQASLADRSQ---LYKDLASPFFGFNAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSE-TD-F-TEDLKKIDVPTLVVHGDADQVVPIESGIASAALVKGSTLKIYSGAPHGL-- |
8 | 1a8sA | 0.12 | 0.11 | 0.92 | 0.34 | CEthreader | | QPIVFSHGWPLNADSWESQMIFLAAQ---GYRVIAHDRRGHGRSSQ-----------PWSGNDMDTYADDLAQLIEHLD--LRDAVLFGFSTGGGEVARYIGRHG-TARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSET---DFTEDLKKIDVPTLVVHGDADQVVPIESGIASAALVKGSTLKIYS-GAPHGLT |
9 | 1a8sA | 0.12 | 0.11 | 0.92 | 1.07 | MUSTER | | QPIVFSHGWPLNADSWESQMIFLAAQ---GYRVIAHDRRGHGRSSQPWSG-----------NDMDTYADDLAQLIEHLDLR--DAVLFGFSTGGGEVARYIGRH-GTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSET---DFTEDLKKIDVPTLVVHGDADQVVPIEAGIASAALVKGSTLKIY-SGAPHGLT |
10 | 1zd4A | 0.09 | 0.08 | 0.91 | 0.85 | HHsearch | | PAVCLCHGFPESWYSWRYQIPALAQA---GYRVLAMDMKGYGESSAP---------PEIEEYCMEVLCKEMVTFLDKLG--LSQAVFIGHDWGGMLVWYMALFYP--ERVRAVASLNTPFIPANPNMPLESIKPVFDYQLYFPGVAEAELE---QNLSRT-FKSLFRARMVTEEEIQFYVQFKKS-GFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHI-EDCGHWTQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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