>PF10225 (247 residues) NVTVTRRFDPKLFFIFLLGLVLFFCGDLLSRSQIFYYSTGMSVGIAASLLIVIFVLSKFM PKKSPIYVILVGGWSFSLYLIQLVLKNLQEIWRCYWQYLLSYVLTVGFISFAVCYKYGPL ENERSINLLTWTLQLMGLFFMYSGIQIPHIALAIIIIALCTKNLEYPIQWLFITYRKMCK AAEKTVPPRLLTEEEYRIQGEVETRKALEELREYCNSPDCSAWKTVSRIQSPKRFADFVE GSSHLTP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | NVTVTRRFDPKLFFIFLLGLVLFFCGDLLSRSQIFYYSTGMSVGIAASLLIVIFVLSKFMPKKSPIYVILVGGWSFSLYLIQLVLKNLQEIWRCYWQYLLSYVLTVGFISFAVCYKYGPLENERSINLLTWTLQLMGLFFMYSGIQIPHIALAIIIIALCTKNLEYPIQWLFITYRKMCKAAEKTVPPRLLTEEEYRIQGEVETRKALEELREYCNSPDCSAWKTVSRIQSPKRFADFVEGSSHLTP | |||||||||||||||||||
1 | 6exsA1 | 0.09 | 0.05 | 0.53 | 0.74 | DisCoVER | TIIPPRGLGVLFFVEFWERFSYYGMGAWIADRITGTR-GATLLGA-VLIIIGHI-CL-SLPFALFGLFSS------------------------------MFFIIIGSGLM--K--------------PN---------ISNIVRLYPIFYMSVNLGALISPGFLLAAIGMA-LGLVWYRKNLGSVGMAPTN------------------------------------------------------- | |||||||||||||
2 | 5fauA | 0.05 | 0.04 | 0.72 | 0.67 | DEthreader | ---------I--PD-GPT--HV--KE-NFL----KQV--VIQDHEIVGSAKISEVNAR----VPAHAPAVTVESMSIGRVDQYMYPFYRADIDGLAFDLAGCM-LVKMSEMMW--I-------K--AGY-QPF-NRIYQPTLATRYLKKIVDVIR-SGM-----------------------DYCLMGCV---TGYTQWPISGTYVDSMAAI-KKLVDDRKYTLAQLNELKADFAGYDQILADLGRR | |||||||||||||
3 | 6iu3A | 0.11 | 0.08 | 0.72 | 0.49 | CEthreader | --EIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADNYARELKREQEEIIRVPDTEAAEVAEILARYLQSAFTIAIAYVLGGLVPLIPYMFIPVARKAVVASVILTLMALLIFGYAKGYFKSALQTALIGAIASAAAFGMAKAVQSENLYFQ------------------------------------------------------------------- | |||||||||||||
4 | 4h8sA | 0.05 | 0.04 | 0.86 | 0.73 | EigenThreader | ADEEVISTLHYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLAS-----NEHDLSMAKYSRLKTEVGKEVAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMI----GFAHGQINFFKKGAEMF---SKRMDSFLSSVADMVQSIQVELEAEAEKMRVSQQELLSVDESVYTPGGN-------------------LMCQPRAGGLIQDLDNCKSGIILQA---ESRKENE | |||||||||||||
5 | 6lmvA | 0.11 | 0.08 | 0.76 | 0.41 | HHpred | -----------------------------AYPLNIYHSLVFMFGPTAALLLIGITVNSLARVRHSWKTTC-------VSW--------IEVLIQSSVAPIAWLFV-VFLGYYRCYRSHEFCLNSTILSFNPCICVNPTDASYLEAESQIYAWGLLLFSGVAAFLCDKYTLVQR---QYVETYKNVE------TQKFDAVAKEHSQLAEHNARAFFGDWTKRDWDWVSGIP-YTPLQLWNDNK----- | |||||||||||||
6 | 5zbgA | 0.12 | 0.11 | 0.89 | 0.40 | MRFsearch | -------WTEMLIMVWVLGMMWSECKELWLEGPREYILQLNVLDFGMLSIFIAAFTARFLASDPQIISEGLYAIAVVLSFSRIAYISLGRTVKDIFKFMVLFIMVFFAFMIGMFILYSYYTVEESFKTLFWSIFNIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQ--------------ATEELAILIHK------ | |||||||||||||
7 | 6bqtA | 0.11 | 0.10 | 0.85 | 0.86 | FFAS-3D | -MEKTELIQKAKLAEQAYDDMATCMKAVTEQGNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIAPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDT---LNEDSYK-----DSTLIMQLLRDNLT-----LW------------------------ | |||||||||||||
8 | 5cwpA | 0.10 | 0.08 | 0.85 | 0.76 | SPARKS-K | -----------MSSDEEEARELIERAKEAAERAQEAAERTPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEALARELVRLAVEAAEEVQRVNEALKKIVKAIQEAVESLREAEESG---DPEKREKARERVREAVERAEEVQRDPSGWLE------------------------ | |||||||||||||
9 | 7a23I | 0.08 | 0.07 | 0.89 | 0.96 | CNFpred | -----------GILFIAVGFLFKIT-DIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQVKRLLAYSSIGHVGYICIGFSCGTIEGIQSL------LIGIFIYALMTMDAFAIVLAL-NPILAITFSITMFSYAGILAGFCSKFYLFFAALGCG-------AYFLALVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYE--PMDRNKSLLLAMTSFFIT | |||||||||||||
10 | 1uf2B | 0.04 | 0.03 | 0.80 | 0.83 | DEthreader | QM-AVD--NVGVQTLAVFIAQSMLNPNISY-----S-LTA-RQRLDINNRFAYFLIKCHATQT-YPVDAIDQW---R--LVAIYNLLPELLTNLIQTYFRGNAQAAEI-LIPADQTSYG--------IN-LA-PI-LIT-INLKTPNLLGIYEAILANTYAAVNVYFFAGGELRLPNL-YSVIMQAHVYYM--LTHI-IP-ITDCF-YI-HTIADAAL--------------GRIDAIKVNILVPIN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |