>PF10223 (236 residues) DGLHIKWYHGANSLSEMHEAIAGDHMMLEGDIILRWWGLPNQTEEPVMAHPPAVNSDNTL DNWLTQILNREDKGIKLDFKGLQVVRPSLELLKEKENLVNHPIWANADVVAGPGSSADPI DPKQFLSIVNEVWPNMTLSLGWTTGCCEPFTRQMMEDMLEVCHGVTQPVTFPARAASFRA SWEHFKWLLEQNPESYTITVWTPSGAEDWEGTDIYDLLYVRNDCDKTLIYYDLPGE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | DGLHIKWYHGANSLSEMHEAIAGDHMMLEGDIILRWWGLPNQTEEPVMAHPPAVNSDNTLDNWLTQILNREDKGIKLDFKGLQVVRPSLELLKEKENLVNHPIWANADVVAGPGSSADPIDPKQFLSIVNEVWPNMTLSLGWTTGCCEPFTRQMMEDMLEVCHGVTQPVTFPARAASFRASWEHFKWLLEQNPESYTITVWTPSGAEDWEGTDIYDLLYVRNDCDKTLIYYDLPGE | |||||||||||||||||||
1 | 1xrsA | 0.05 | 0.05 | 0.94 | 1.17 | DEthreader | KSGPLLYVIVATGIEDITQAVAAKADVIAVIRQSLLD-----YVPYGAT--EGFGGTYATQENFRLMRELDYIRLCNYCSG-LCMPEIAAMGAIE---R--LDVMLNDALYGILFRDINMTMIDQNFSRIINFAGVIINTGENLTTADAEAHTVLASQFINEQLLPEQMGLGHAFEMGFYELSQAQMAREIFPKAPLKYMPPTKFMTGNKGIQDALFNMVTIMTNQ-RIHLLGMPD | |||||||||||||
2 | 3kozA1 | 0.07 | 0.06 | 0.94 | 1.17 | DEthreader | QPLPVITTEIASRFEDDIRRMRMAADHIMVIRGQSHY--D--GLIEGTPQGIG--GVPITRKQVRAQRKLDPINYHSYVSG-VAGPDIAVMFAEE---G--VNGAHQDPQYNVLYRNINMISFIDACESKTIMADMAQIDGANNATARAVMPELMVQHALNSIFLMKNICLSTVPPTASLDLPYAVALREMFEGYRMRAQMNTKYMEASEAVTHVLNLLISKLTR-ADIQSTITPD | |||||||||||||
3 | 3ks6A | 0.11 | 0.09 | 0.80 | 1.11 | HHsearch | --GTRIASHGDSTPHGFTATAA-ALEEVEFDLHPTA------DGAIVVHHDPTLDSHPTLEELCALYVD-SHVNFRCEIKPGGFVALVIAGLERH-S--LERTTFSS------------FLLAS--DELWKATTR-PRL--WLVSPSV-LQQLGPGAVIETAIAHS-IHEIGVHIDTADAG---L-AQVQA--AGLDFGCWAAH-T-------PSQITKAL-DLGVKVFTTDRPTL | |||||||||||||
4 | 2w5fB2 | 0.04 | 0.03 | 0.93 | 1.17 | DEthreader | YNYFRVGSVLNGTVNNIKALILREFNSITCNMKDATLV-QSGRVSLN-----------RAASILNFCAQNN-IAVRGHTWTLSYIKNMFAEIQRQY-PSLNLYAYDVNAAVSDDRRRSWNFIEKAFTYARKYAANCKLYYNDYNEYWDHKRDCIASICANLYNKGLLDGVGMQSHISGINYKAALQKYINIGC--DVQITELDISTENKFQQKYKAVFQAAVDINRKVTAVCVGFN | |||||||||||||
5 | 3kozA1 | 0.09 | 0.08 | 0.94 | 1.17 | DEthreader | SPLPVITTEIASFEDDIRRMRMAWADHIMVIRQSHYD----GLIEGPQGIGG---VPITRKQVRAQRKADEPINYHSYVSGVA-GPDIAVMFAEE---G--VNGAHQDPQYNVLYRNINMSFIDACESKTIMAWDMAQIDGANATAREAVMPELMVQHALNSIFSMKNICLSTVPPTASLDLPYAVALREMFEGYRMRAQMNTKYMEASEAVTHVLNLLISKLTRA-DIQSTITPY | |||||||||||||
6 | 3kozA | 0.07 | 0.06 | 0.94 | 1.17 | DEthreader | QPLPVITTEIASRFEDDIRRMRMAADHIMVIRGQSHY--D--GLIEGTPQGIG--GVPITRKQVRAQRKLDPINYHSYVSG-VAGPDIAVMFAEE---G--VNGAHQDPQYNVLYRNINMISFIDACESKTIMADMAQIDGANNATARAVMPELMVQHALNSIFLMKNICLSTVPPTASLDLPYAVALREMFEGYRMRAQMNTKYMEASEAVTHVLNLLISKLTR-ADIQSTITPD | |||||||||||||
7 | 2o55A | 0.15 | 0.12 | 0.81 | 0.69 | HHpred | ---PKIVLAPENTLRSFVLC-ERNIPYIETDLRVCK------TGEIVLFHGTTIHTIPSLEELFVAIEEQKNLKLNLELKGEEWKQRLLLLVE-K--YHQERVDYCS------------FH-HEALAHLKALCPDVKITYLFNYGQPTPLDFV------EQACYGDNGVSLF---HYL--T-KEQVCTAHEK--GLSVTVWPWIFD-----DSEEDWKKCLE-LQVDLICSNYPFG | |||||||||||||
8 | 1vd6A | 0.12 | 0.09 | 0.77 | 0.61 | DisCoVER | RPLRLGHRGAENTLESFRLALEAGLDGVELDVWPTRD------GVFAVRHFQVDYDLPRLEEVLALKEAFPQAVFNVELKSEEAARRLAALLR--GR---EGVWVSSFDP-------------LALLALRKAAPGLPLGFLMAE-----D-------HSALLPCL-GVEAVHPHHALV------TEEAVAGWKRGLFVVAWTVNEEGEARRL--------LA-LG--LDGLIGDR- | |||||||||||||
9 | 3qvqA | 0.16 | 0.13 | 0.79 | 0.50 | MRFsearch | --LPQVIAHRGSTLASLHLAGQQGIKWVEIDVLSGD-------GIPVIFHDDYLETIPTLLEAIEVISQY--GGLNLELKPEETIAASVEVLKQHWPQDLPLLFSSF--------------NYFALVSAKALWPEIARGYNV---------SAIPSAWQERLEHL-DCAGLHIHQSFFD--VQQVSDIKAA---GYKVLAFTIN---------DESLALKLYNQGLDAVFSDYPQK | |||||||||||||
10 | 4oecA | 0.14 | 0.11 | 0.84 | 0.67 | SPARKS-K | RDRVIVLGHPENTLLAFRKAVEAGADGIELDVWLT------KDGRVVVMHDEQGERIPTLEEVFEAI--PRNALVNVELKDRDAAREVAEIVAENN---PERVMISSF------------DI-DALREYRKYDDETTMGLLID-------REEVVPLIPKLKDELNLWSVNVPMEAIPLIGLEKTLQALHWVRSLLKVVLWT-------ENDVLFYKDDNLAKLKGLFVIANDVVR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |