Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LTIRLIKNFEYRTVKYLILHEVNLETTTVGKLKNIIKEKINTIAGFKPFRNVNYDTLKLYTKAHGAKTQNLTINLDHDEWIFENDEATLISHKLENESEISFFNREIYEAYKLHPEIKW |
1 | 6hftA2 | 0.15 | 0.12 | 0.79 | 1.00 | DEthreader | | PALIMYP-T---QDEFDFVGEVS-ELTTVQELVDLVLE--GPQE-RFKKKEFTPVLVFMETK-----------A-GGL-IKA-GKKLTFHDILPLNALKIYIVPKVESEGWISKWD--- |
2 | 6hftA2 | 0.16 | 0.13 | 0.79 | 1.00 | DEthreader | | ALIMYPT-----QDEFDFVGEVS-ELTTVQELVDLVLEG-P-QE-RFKKEKENFVLVFMET-K----A-G--GL-----IKAG-KKLTFHDILPLNALKIYIVPKVESEGWIS-K-WDK |
3 | 1v6eA | 0.09 | 0.06 | 0.67 | 0.78 | DisCoVER | | VMVFISSSLN--SFRSEKRY-S-RS-LTIAEFKCKLEL---------VV-GSPACMELELYGAD------DKFYS----K-LDQEDALLGSYPVDDGCRIHVID--HS----------- |
4 | 6hftA | 0.15 | 0.12 | 0.79 | 1.00 | DEthreader | | PALIMYP-T---QDEFDFVGEVS-ELTTVQELVDLVLE--GPQE-RFKKKEFTPVLVFMETK-----------A-GGL-IKA-GKKLTFHDILPLNALKIYIVPKVESEGWISKWD--- |
5 | 1t0yA | 0.11 | 0.08 | 0.71 | 0.48 | CEthreader | | LEITTN------ATDFPMEKKYPAGM-SLNDLKKKLELVVG--------TTVDSMRIQLFDGD------------DQLKGELTDGAKSLKDLGVRDGYRIHAVDVTGGNED-------- |
6 | 3tuoA | 0.07 | 0.05 | 0.75 | 0.72 | EigenThreader | | VFCVVEHAIEYDCEHAEFVL--VRKDMLFNQLIEMALLSL----GYS-HSSAAQAKGLIQVG------KWNPVP---LSYVTDAPDATVADMLQDVYVTLKIQLH-------------- |
7 | 1wjuA | 0.17 | 0.11 | 0.66 | 0.48 | HHpred | | ATIEVFLPPRLKKDRKNLL-ETRLHIT-GRELRSKIAETF----GLQE------NYIKIVIN----------------KKQLQ-LGKTLEEQGVAHNVKAMVLELKQ------------ |
8 | 5zmbA | 0.11 | 0.07 | 0.64 | 0.33 | MRFsearch | | --PVSVQCC--EGRFELSVDS----NHTLRDVLRQFKREVAALDPI------NLEEYVVNHE----------------GKLLLDDSVTLQTVGVKKDSVFVLVRKA------------- |
9 | 4melA2 | 0.13 | 0.09 | 0.73 | 0.54 | FFAS-3D | | VELLLVRHNDLGKSHTVQFS----HTDSIGLVLRTARERFLVEPQ---------EDTRLWAKNSEGSLD-----------RLYDTHITVLDAALETGQLIIM--------ETRKKDGTW |
10 | 4melA2 | 0.14 | 0.10 | 0.73 | 0.83 | SPARKS-K | | VELLLVRHNDLGKSHTVQFSH----TDSIGLVLRTARERFLVEPQED---------TRLWAKNSEGSLD-----------RLYDTHITVLDAALETGQLIIMETR--------KKDGTW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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