Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | SLLVLRGLGIQTSSSAGSYLAGTATRFIPTEKIRDVLVNEAFRGFEVRHYLVVVVEGEGELVVVF |
1 | 1t77A1 | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | | ALSVTSSE-LYFEVDEDPNFKLGLHGKWLFTEIRSIFSRRYL---LQNTALEIFMA-NRVAVMFN |
2 | 6vbu5 | 0.20 | 0.18 | 0.91 | 1.00 | DEthreader | | LLLVTN-LRIVWHSL-----ALPVNLSIGYNCILNITTRTANSKLRQTEALYVLTKSTRFEFIFT |
3 | 1t77A | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | | ALSVTSSE-LYFEVDEDPNFKLGLHGKWLFTEIRSIFSRRYL---LQNTALEIFMA-NRVAVMFN |
4 | 6vbu51 | 0.20 | 0.18 | 0.91 | 1.00 | DEthreader | | LLLVTN-LRIVWHSL-----ALPVNLSIGYNCILNITTRTANSKLRQTEALYVLTKSTRFEFIFT |
5 | 5ixdA2 | 0.15 | 0.12 | 0.82 | 0.24 | HHpred | | EVMVTGNLGIQWRHKP----NEEWNNFSFFPEITHIVIKES----V----VSINKQDNKKMELKL |
6 | 6u4zA1 | 0.14 | 0.12 | 0.89 | 0.55 | DisCoVER | | ------DPVGQLEVYKTSREKEILVKFIRTNIQIEIAYRNTEVPAEGTYEVAITLIGASESKSQ- |
7 | 4ekuA | 0.23 | 0.20 | 0.86 | 0.67 | MRFsearch | | --LVIGPKGIRQLTSQ----DAKPTCLAEFKQIRSIRCLPL---EEGQAVLQLGIEGPQALSIKT |
8 | 7byjA2 | 0.10 | 0.09 | 0.91 | 0.69 | SPARKS-K | | TLLVGPRYGISHVINTK---TNLVALLADFSHVNRIEMFSEEES---LVRVELHVLDVKPITLLM |
9 | 1v3eA | 0.06 | 0.06 | 0.97 | 0.58 | MAPalign | | SVILDSRVNPVITYST--ATERVNELAILRLSAGYTTTSCITHYNKGYCFHIVEINNTLQPMLFK |
10 | 1zvrA1 | 0.13 | 0.12 | 0.95 | 0.61 | CEthreader | | GTLTVTNYRLYFKSMERD---PPFVLDASLGVINRVEKIGGASRGENSYGLETVCKDIRNLRFAH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|