Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GQISSLMGQSNVKLDASAIEKQRQDQLEYELAKTDLTFVRNHALDIADRRERFAWESLATGTLLAALCVWGSFMKRKDFIIPCVPLVLGAGYRYENSYGEQLETLRDNAERLLQESPQLLTRPGGPITMAEID |
1 | 2efkA | 0.07 | 0.06 | 0.86 | 1.17 | DEthreader | | LQEVNDFAGQRELVAENLSVRCLELTKYSQE-KQERK-HFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAARSHAEESKNEYAAQLQRFNRDQA-HFYFSQPQ-IFD-LQ---DDERR----------- |
2 | 4dylA1 | 0.07 | 0.06 | 0.85 | 1.17 | DEthreader | | TEGLSRLLRQHAEDLNGPLSKLSLLIRERQQLRKTYSEQWQQLQQELTKTSQDIEKLKSQYRALARDSAQAKRKYAKDYSWKLFAHHNRYVLGVRAA-QLHHQHHHQLLLPGLL------------------- |
3 | 4mu6A1 | 0.07 | 0.05 | 0.77 | 0.65 | DisCoVER | | ------------------------DKIQKEQDDAEALKDKKLKEVLTRELNHIPTQISEQQTELRLLHYKLERLFIERLQRSINEREIKIQSLFEQEV-----NNKIKLNEIEKRASVRHTKRVKRAQARI-- |
4 | 4wpeA | 0.09 | 0.08 | 0.87 | 1.17 | DEthreader | | VSVEKARAQSHSKQSEILFRIYTDTKAFAANLQARYTTLSGKIERL-RDKFNKKKGCEVLQKKLQDAQIRFRDLQLWESQEYKV-QLDVLKQEYKASQ-KFWIHEWAQLSCELQ-E-ENAR------------ |
5 | 6ysfE | 0.05 | 0.05 | 0.98 | 0.69 | CEthreader | | NNLTDDYMKKGLRMVVDGIEPETIREIMELEIDEMEKRHKSGADMLKTWGGYAPAFGMVGTLIGLIQMLANL--TDSSTIASGMGKALITTFYGSLMANAVFNPMGANLMFKSGVEATTREMVLEGVLAIQSG |
6 | 6yslG | 0.07 | 0.07 | 1.00 | 0.73 | EigenThreader | | SLIGIILAFVALSVGMVLKGEELIPMFSEWAQLARREGIRDIMTEEVEGAAIFTQAGTYAPTLGVLGAVIGLIAALSAAFVATLLGIFTGYVFANKLKRKSKQEVKLREVMIEGVLSVLEGQAPKVIEQKLLM |
7 | 5gupg | 0.12 | 0.08 | 0.61 | 0.28 | HHpred | | -----------------------------------------------TDP-RLVYMGFL-G--YCSGLIDNAIRRRPVVGLHYVTSFVFFGYYLLKRQDYMYALRDHDMFAYVKSHPEDFPE-KDKKTYGEIL |
8 | 5mkkB1 | 0.12 | 0.11 | 0.89 | 0.37 | MRFsearch | | --VASAALSGLLSYAMRRLAVVASRQVEYDLRRMNRLNTDLSAVREMVGPGILMGSRLSFLVLLAFLSMYAVNARLAFYLTLILPGIFLAMRFLLRLIDRRYREAQEVFDRISTLAQEAFS------------ |
9 | 4hkrA | 0.13 | 0.12 | 0.91 | 0.72 | FFAS-3D | | ----TYLSWRKLQLSRAKLKASSKTALLSGFAMVAMVEVHMLALMISETAWAFSTLLGLILFLLEIAILCWVKFYDLSVLIPVMIIFMAFAIHFYRSLVHKYEVTVSGIRELEMLKEQM--------EQDHLE |
10 | 5cwjA | 0.12 | 0.11 | 0.95 | 0.76 | SPARKS-K | | ERIRRILKEARKSGTEESLRQAIEDVAQLAKDSEVLEEAIRVILRIAKESGS----EEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESGSE--EALRQAIRAVAEIAKEDPRVLEEAIRVIRQIAEE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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