>PF10145 (201 residues) QQARDIGGSTAFSPTDVARTQDTLARSGYDADAILAATEPTVNLSLASGVDIAEAADIVT NMQSAFNLPLDQIKRVSDVMAKGFTSSNTNLLELGEAMKYVAPIAEAAGASIEDTTALLG VLADNGIKGSMAGTSTSAVFSRLQAPVGKAPEALRELGITTRDGKGNMLPVEKILKDINR SFKKNKLGTAQQAEYLKVIFG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | QQARDIGGSTAFSPTDVARTQDTLARSGYDADAILAATEPTVNLSLASGVDIAEAADIVTNMQSAFNLPLDQIKRVSDVMAKGFTSSNTNLLELGEAMKYVAPIAEAAGASIEDTTALLGVLADNGIKGSMAGTSTSAVFSRLQAPVGKAPEALRELGITTRDGKGNMLPVEKILKDINRSFKKNKLGTAQQAEYLKVIFG | |||||||||||||||||||
1 | 4yxxA | 0.18 | 0.17 | 0.93 | 1.04 | FFAS-3D | -KILKVAAELGTTVEEAVKALKLKTKLGVSLEQALKILEVAAEL----GTTVEEAVKRALKLKTKLGVSLEQALKILEVAAKL----GTTVEE---AVKRALKLKTKLGVSLEQALKILKVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILEELGTTVEEAVKRALKLKEQALKILEVAAKLGTTVEEAVKRALKL-- | |||||||||||||
2 | 5cwcA | 0.11 | 0.09 | 0.83 | 0.78 | DisCoVER | ---------SEKE-ELRERLVKICVENADDTEEARAAREAFELVREAAIDVLELAIRLIKECVENAYDISEACRAAAEAFKRVAEAARAVLELAIRLIKECVENAQREGYDISEACRAAAEAFK--RVA-----E--AAKRAGITSSETLKRAIEEIRRVEEAQREGNDISEACRQAA--------------EEFRKKAE- | |||||||||||||
3 | 5cwcA | 0.10 | 0.07 | 0.73 | 0.83 | DEthreader | EERERLVKICNAAREAAREAFELVREAAEDSSEVLELAIRLIKECVENAEACRAAAEAFKRVAEAAITSSEVLELAIRLIKECVENAEYDISEACRAAAEAFKRVAAITRAIEEIRKRVEEAQREGNDISEACRQAAEEFRKKAEE-----------------L------------------------------------- | |||||||||||||
4 | 4yxxA | 0.15 | 0.14 | 0.95 | 0.95 | CEthreader | LKILKVAAELGTTVEEAVKRALKLKTKGVSLEQALKILEVAAELG----TTVEEAVKRALKLKTKLGVSLEQALKILEVAAKLGTT-------VEEAVKRALKLKTKLGVSLEQALKILKVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILEVAAELGTTVEEAVKRSLEQALKILEVAAKLGTTVEEAVKRALKLKT | |||||||||||||
5 | 6rwbA | 0.08 | 0.08 | 0.96 | 0.88 | EigenThreader | SYAKRLAHATQLSVEQLQWLNKNAIENSSAKLEILAVISEYRRLHQRYGLSVDPFIAIINAVIAKYCSKKFSQLYRMAMIPRTL---GVSFSQAEYLWQLYMEKIAQGNALTIIDAIIVLWMSEQKLDITTLQAMLT-----KQYSTTATPELFNFLSNIYQTLGKQVYSESLKPNLYRSLANGFHLKANVVAGLVNWLAK | |||||||||||||
6 | 4yxxA | 0.18 | 0.13 | 0.75 | 0.28 | HHpred | --ALKLKTKLGVSLEQALKILEVAAELGTTVEQALKI----LEVAAKLGTTVEEAVKRALKLKTKLGVSLEQALKIL-K---VAAELGTTVE---EAVKRALKLKTKLGVSLEQALKILEVAAELGTTVEEAVKRALKLKTKLGVSLEQALKIAAKLGTTVEEA------------------------------------- | |||||||||||||
7 | 2ch7A | 0.08 | 0.08 | 0.98 | 0.65 | MRFsearch | --LKKVIEVTRMISNSAKDVERVVESFQKGAEEITSFVETINAIAEQTNLGFAVVADEIRKLAEESQQASENVRRVVNEIRSIAEDAGKVSSEITARVEEGTKLADEADEKLNSIVGAVERINEMLQNIAAAIEEQTAAVDEITTAMTENAKNAEEITNSVKEVNARLQEISASTEEVTSRVQTIRENVQMLKEIVARY-- | |||||||||||||
8 | 5cwcA | 0.19 | 0.15 | 0.83 | 0.90 | FFAS-3D | SEKEELRERL------VKICVENAKRKGDDTEEAREAAELVREAAERAGIDSSEVLELAIRLIK-------------ECVENAQREG-YDISEAAEAFKRVAEAAKRAGITSSEVLELVENAQREGYDISEACRAAAEAFKR-------VAEAAKRAGITSSE------TLKRAIEEIRKRVEREGNDISEACRQAAEEF- | |||||||||||||
9 | 6w2rA | 0.13 | 0.12 | 0.97 | 0.79 | SPARKS-K | ----GTTEDERRELEKVARKAIEAAREG-NTDEVREQLQRALEIARESGTKVKLALDVALRVAQEAAGNKDAIDEAAEVVVRIAEESNNSLEQALRVLEEIAKAVLKSEKTAKKAVKLVQEAYKAAQRAIEAAKRTKLAIKLAKLAARAALEVIKR--PKSEEVNEALKKIVKAIQEAVESLREAEGDPEKREKARERVRE | |||||||||||||
10 | 5cwbA | 0.17 | 0.14 | 0.83 | 0.74 | CNFpred | --------------RRVAEKVERLKRSGTSEDEIAEVAREISEVIRTLGSSYEVICECVARI----------VAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSSARIVAEIVEALKRSGTSEDEIAEIVARVISEV-------IRTLKESGSSYEVIK---ECVQRIVEEIVEALKRSGTSEDEINEIVRRVKS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |