>PF10111 (277 residues) SVIIPFGLSKERPYIEERVLQKAKFFQSDENIEFIFVEGYSSKDHELKNFIQANHHIYLK DMDQKAFSQGRCRNLGASYAHSNVLLFLDVDCYISLDNFEKILKLIQIKNISQNINALIV LPVVYLNKEANEKLKQYDDKFWDILIQEDLFTAKNTWVKFFAPSSTSSIVINKHQFLRLG GNDENFIGHGYEDFDLFARILKACVSFEKMPTNLSYDARNWNFFNFKGFRSWFSLLGYEA CFYGIYIYHFYHIEPNQNAYMQNKDKNHQLFYKHLKN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | SVIIPFGLSKERPYIEERVLQKAKFFQSDENIEFIFVEGYSSKDHELKNFIQANHHIYLKDMDQKAFSQGRCRNLGASYAHSNVLLFLDVDCYISLDNFEKILKLIQIKNISQNINALIVLPVVYLNKEANEKLKQYDDKFWDILIQEDLFTAKNTWVKFFAPSSTSSIVINKHQFLRLGGNDENFIGHGYEDFDLFARILKACVSFEKMPTNLSYDARNWNFFNFKGFRSWFSLLGYEACFYGIYIYHFYHIEPNQNAYMQNKDKNHQLFYKHLKN | |||||||||||||||||||
1 | 4hg6A | 0.10 | 0.09 | 0.86 | 1.17 | DEthreader | DILVPSY-N-EPADMLSVTLAAAKNMIYPARLRTVVLCDDGARRRELQQLCRELGVVYST-RERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVE-DP----DLFLVQTPHFFINPDQPENEMFYGKIHRGLDRW-G---------G-AFFCGSAAVLRRRALDEAGGFA-GE--TITEDAETALEIHSRGWKSLYIDRAMIAGLQPSFIQQRGRWATGMMQMLLNPLFR-LMSWLARAIV--TT-LRPRSA------------ | |||||||||||||
2 | 6iwqA | 0.18 | 0.17 | 0.94 | 4.06 | HHpred | SVVIVF--HNEGWSTLMRTVHSVIKR-TPRKAEIVLIDDFSNKEHKLDEYIKLWGLVKVFRNERRE-GLIQARSIGAQKAKGQVLIYLDAHCEVAVNWYAPLVAPIS-----KDRTI-CTVPLIVINGNTYEIIPQGGAWDWSMLWKQEKRLRKTKTEPYRSPAAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHYRLENPPPIYTLKNYVRVVEVWWDEYKDYFYASRPESQA-LPYISELKKFREDHN----- | |||||||||||||
3 | 2z86C1 | 0.16 | 0.12 | 0.76 | 0.83 | DisCoVER | SIVIPTYNR-AK-ILAITLA-CLCNQKTIYDYEVIVADDGSENIEIVREFESLLNIKYVRQK-DYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELL----A---DDNVALIGPRKYIDTSEIPEIITNQNKSVDWRIEHFKNTDNLRLCPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPG------------------------------------------------------- | |||||||||||||
4 | 2d7rA1 | 0.17 | 0.16 | 0.96 | 0.42 | MRFsearch | SIIIPFH--NEGWSSLLRTVHSVLNRSPELVAEIVLVDDFSDREHPLEDYMALFPSVRILRT-KKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARN------RKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPEAGDVAVQKKLRSSLFKWFMTKIA- | |||||||||||||
5 | 5heaA | 0.13 | 0.12 | 0.88 | 1.40 | SPARKS-K | SIIVPVY--NVEKYL-KRCLDSLLR-QTYKNFEIILINDGSTDNIICEEYAKIDNRIQILHQTNA--GPSAARNAGITYASGKYITFVDSDDFVEEFYLEHLYRALVDN----GSDISVCNFNSFNEDRFLFSITKYFCKNYTI---AEWMDLNLFLTFT----FSPTKLFKAELFEGIR-FPL---GRLREDDATIYRLYLKASQITFINEGSYYYSQR------DDISSMISNAEERIALLASM-------GYDLTEQIKSYKGRLKKCCEDALR | |||||||||||||
6 | 2z86C | 0.15 | 0.14 | 0.94 | 0.82 | MAPalign | SIVIPTYN--RA-KILAITLACLCNQKTIYDYEVIVADDGSKE--NIEEIVREFLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAV------DDNVALIGPRKYIDTPEIITKSVD-WRIEHFKNTDNL---RLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDSTDDTLRILQEHYASNTAVRL-- | |||||||||||||
7 | 2z86C2 | 0.10 | 0.09 | 0.90 | 0.54 | CEthreader | LVSIYIPAYNCSKYIVRCVESALN--QTITDLEVCICDDGSTTLRILQEHYANHPRVRFISQKNK--GIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKD-----LSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSA-----------MICHHFRMFTARAWNLTEGFNESISN--AVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI------ | |||||||||||||
8 | 2d7rA1 | 0.18 | 0.17 | 0.98 | 1.21 | MUSTER | SIIIPFHNE--GWSSLLRTVHSVLNRSPPEVAEIVLVDDFSDRKKPLEDYMALFPSVRILRT-KKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSVGHIYRKYVPYKVPLARNLKRVAEVWMDEYAEY---IYQRRPEYRHLSAGDVAVQKKLRSSLNC | |||||||||||||
9 | 1xhbA | 0.18 | 0.17 | 0.94 | 1.98 | HHsearch | SVVIVF--HNEAWSTLLRTVHSVIN-RSPRHEEIVLVDDASERDFPLESYVKKLKPVVIRMEQR--SGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIK-----HDRR-TVVCPIIDVIDDTFEYMAGSDMFNWKLNPQREMDRGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFGQIINKNN-----RRLAEVWMDEFKNFFYIISPGVGDISSRLGLRRKLQKPFSWYLEN | |||||||||||||
10 | 2ffuA1 | 0.19 | 0.17 | 0.94 | 1.83 | FFAS-3D | SVVITFH--NEARSALLRTVVSVLKKSPPHIKEIILVDDYSNDPEDGALLGKIEKVRVLR--NDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDR------TRVVSPIIDVINMDNFQYVGASADLKGTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTGGSGTVFARNTRRAAEV-------WMDEYKNFYYAAVPSQSRLELRKKLS- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |