Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | QQNLSELKQAVVLLSAPKGIALSSGEHLQMSASENLIATAGKNTDISVAKNLFIGVGNTLSIFVRKLGMKLIANQGPITVQAQNDLMELLARKAITITSTENEIKITAKKRITLNAGGSYITLDENRIESGTAGEYMTKAGHYE |
1 | 6sjlA | 0.28 | 0.28 | 1.00 | 2.66 | HHpred | | NASLTDLTAPGMLLHAPDGIGMVSARALRIASGSSVGIMSGDNTDITAGQSFTVVAEGAVSLLSRNQGMQLLAAKGRVNIQAQSDDLSMSSQQNLDIQSSEGKVTVSANQELILACGGAYIKLSGGNIELGCPGQILLKSTNGG |
2 | 6sjlA | 0.30 | 0.29 | 0.99 | 1.30 | MRFsearch | | --SLTDLTAPGMLLHAPDGIGMVSARALRIASGESVGIMSGDNTDITAGQSFTVVAEGAVSLLSRNQGMQLLAAKGRVNIQAQSDDLSMSSQQNLDIQSSEGKVTVSANQELILACGGAYIKLSGGNIELGCPGQILLKSTNGG |
3 | 4peuA | 0.13 | 0.11 | 0.88 | 1.49 | CNFpred | | ----------NACIYSRDDITIKGNGNLTVNANFNNGIGTSNDLKITG-GNITVKAF-NNGLKGN---GSVTISGGNIDITAGADGIKVEN-HKGYVNITGGTIKIRAK-DDAIDSV-RSVSINNADVKVSVGKDVKCEGVLNI |
4 | 3jx8A | 0.09 | 0.08 | 0.90 | 1.31 | CNFpred | | ----------ELNTVGSGSFIIS-VNRMEINMAGSGNVELRGPVKGY---KLECNMAGSGNIIAK-DNLSCSLASGEIEVIGTVDRASFNVAGEIKAFDCARKAECNIAGEISVYATILDANIVGGEIHYKGDPEISKSIMGSG |
5 | 6u9eB | 0.15 | 0.10 | 0.66 | 0.87 | DisCoVER | | -----------------------------------------ADHIFNLEEGLLIDIKDGCTTKLESSKITHNATADKQIIENVKDSKISITEKEILLAT-KKSSIMLSEDKIVIKIGNSLIILDDSNISLESATINI------- |
6 | 5mz9A | 0.08 | 0.07 | 0.91 | 0.83 | DEthreader | | ---------YTLNLAK-FLNAWPYEEAYLNTK-QALEIQLPSLATPVSIAPDGFFSVGLVLTRGTAAEVLTFKE-VTSYIIVQSGIQSQTL-TGVLPLSEEFSAVIAKQNKIDIYKNDQLSVATNNGPSDAGPAIQFYTIAVPL |
7 | 6orjA | 0.16 | 0.16 | 0.99 | 0.72 | CEthreader | | PPDVRGEKIAIYRLGDTSQFYWRSGLSNDLRTLESVVYTFNASFQFSAHDKHVTIGTSKVQINTGTGAVYILDDIGNRFELVSKDK-RLLNADNSFVKVEKKAIDLNADQYIKLTSGGSTLELNPTEFKVNTTNTTIKSSGTHI |
8 | 4ld1A | 0.05 | 0.05 | 0.96 | 0.68 | EigenThreader | | LPD-----GGRLVVFPNGTRKELSGQTVKVMFFNGDVKHTMPDQYYYAEAQTTHITYGMEVLQFPNNQTEKHFPDGRKEITFPDQTVKTLHDGREESVLTDGTIIQLNPDGVIQFNTGQREIHT-ADFKRRDGTVKTVYSDGRQ |
9 | 4mtkA | 0.12 | 0.10 | 0.88 | 0.60 | MRFsearch | | ----------EIRMEDAEQLYIHAERNQDNLVENDASLSVGHDRNKSIGHDELARIGNNRTRAVKLN-DTLLVGG-AKSDSVT-GTYLIEAGAQIRLVCGKSVVEFNADGTINISG--SAFNLYAGNGNIDTGGRLDLNSG--- |
10 | 6sjlA | 0.29 | 0.29 | 0.99 | 0.91 | FFAS-3D | | -ASLTDLTAPGMLLHAPDGIGMVSARALRIASGESVGIMSGDNTDITAGQSFTVVAEGAVSLLSRNQGMQLLAAKGRVNIQAQSDDLSMSSQQNLDIQSSEGKVTVSANQELILACGGAYIKLSGGNIELGCPGQILLKSTNGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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