Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | PPPDVIRGYDQILPGGAERIFSMAEKEQAHRHKMDSTAVNGAIRKDKRGQ |
1 | 4k1pA | 0.08 | 0.08 | 1.00 | 1.33 | DEthreader | | ILLPLIQKLSQTEAEATQITFVEDQVSSFTELIDRQITTLETLLTDWKVL |
2 | 4k1pA | 0.08 | 0.08 | 1.00 | 1.50 | DEthreader | | ILLPLIQKLSQTEAEATQITFVEDQVSSFTELIDRQITTLETLLTDWKVN |
3 | 4k1pA | 0.08 | 0.08 | 0.98 | 1.33 | DEthreader | | ILLPLIQKLSQTEAEATQITFVEDQVSSFTELIDRQITTLETLLTDWKV- |
4 | 4xngA | 0.06 | 0.06 | 0.96 | 1.33 | DEthreader | | TK--IFIGGSEYTPQREIGLRQFIITLRQRFKKLSQKIDSSLKQIETEAK |
5 | 6tejA | 0.09 | 0.08 | 0.94 | 1.33 | DEthreader | | LAF-VLLE--LLLGLTAVSLIGLGAVLAAAMTLWLHRVDARFAHELRGRT |
6 | 3l8iA1 | 0.10 | 0.08 | 0.82 | 0.24 | HHpred | | --RAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAA------- |
7 | 5l0wA | 0.20 | 0.06 | 0.30 | 0.74 | DisCoVER | | -----VVEANALVPGWGQII------------------------------ |
8 | 2vzbA | 0.15 | 0.14 | 0.92 | 0.37 | MRFsearch | | ---CAILRYQEIAYTTCDIAKHILAEEEEHEQDLQDYLTDIARMKESFL- |
9 | 6xt4A3 | 0.19 | 0.18 | 0.96 | 0.81 | SPARKS-K | | PDPLALAAAVVAQPGLAKKALEIIERAAEELKKSLAIAAEALVIALKS-- |
10 | 4e1jA | 0.06 | 0.06 | 1.00 | 0.63 | MAPalign | | VAGAAVQWLRDGLKVITAEFARAALEAVCYQTRTTALGVAWLAGSRAGVW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|