Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | AYIRIEDVHPLTDPKKLRAIADFLYSRHIPFMVAVIPVYTDAAGGNVVNFEDKPEFTAALHYMEDRGGSLIMHGYKHRYRDGETGEGFEFWDAQSDKPIPDEAAYMTDKLEKGIARMAKQGLYPLAFEPPHYAMSQTGYRIVNRYFSTLVGNLQLNDTTYLVSQQPPYRLQHSLAGLKVVPETIGYVADEAGAAAPMLEKAKQLMIVRDSVIGAFFHPYLKLSQLTELVDGL |
1 | 3rxzA | 0.13 | 0.11 | 0.81 | 1.17 | DEthreader | | VAFTFDVDAEAGPLVGVPRLLGILDEFNVPGTFFVPGYT----------AH-R--HPEPIRSIARAGHEIAHHGYLHE----------SLV------GA--DEDTERKILTRGIEALEEVGVHPVGYRAPWE-NW-HTPKLLAEFGFLYDSTL-------DSD--HPYELAVGDGSLVELPVSALDDQYTPKAIELWRAELNA-RDIG-GAWVLTNHPLSRAAALREFIAEV |
2 | 4lypA | 0.09 | 0.09 | 0.97 | 1.17 | DEthreader | | IRGANYWQGMNLDRKRMELEIKQMAEMGINNLRVMAS-SEGPDDQPSMYNEGVVGLDYLLDTMDRYNMTAVMTLGNFGFGPYPYFTFAARFY---DSEIAPANKLFKDHIYTVQNRRNTGKYDIMSWQANEPQAPASWFEISTFIKHLVSGLESLDYDFCHCMFSRSWAAQL---NKPIVMEEFGMARKTTHKDEYYQKAFNQIVSLARFSGSNFWAGLSYSNDTVQIIKDY |
3 | 3s6oA | 0.14 | 0.12 | 0.82 | 1.83 | HHpred | | VQFVLNYEEPARSRAGVWRILREFDKRGLPLTVFGVGMAIE-------------RHPELARAFVELGHEIACHGWRWIHYQD------------------MTPEREAEHMRLGMEAIERVGVRPLGWYTGR--DSPNTHRLVAEGFLYD------SD--HYGDDLP-FWMDVESVPQLIVPYTLDANDMRGNTADHLRDAFDVLYEEAPKMMSIGMHCRLLFRALQRFLDHI |
4 | 3rxzA | 0.13 | 0.10 | 0.81 | 0.72 | DisCoVER | | VAFTFDVDAESHQAYGPLVGVPRLLIFNVPGTFFVPGYT----------AH---RHPEPIRSIARAGHEIAHHGYLH-----------ES-------LVGADEDTERKILTRGIEALEEVAVHPVGYRAPW--ENWHTPKLLAEGFLYDSTLD-----------SDHPYELAVGGSLVELPVSLDDWYCFIETPAKAIELWRALNARIGGAWVLTNHPFLSGRRAAALREF- |
5 | 3qbuA | 0.13 | 0.11 | 0.82 | 0.50 | MRFsearch | | --YGVDIDAVFAGEVGIPRLLKLFKKYHLPATWFVPGHSIE-------------TFPEQMKMIVDAGHEVGAHGYSHENPIA------------------MSTKQEEDVLLKSVELIKDLTKAPTGYVAPWWEFSNITNELLLKHFKYDHSLM--------HNDFTPYYVRVVETNLVEIPANWYLDVSPRDIGQMWIDQFDWVYREMYAVFSMTIHPDVSLLMHEKIIEHI |
6 | 2iw0A | 0.12 | 0.09 | 0.74 | 0.91 | SPARKS-K | | VALTYDDGPF----TFTPQLLDILKQNDVRATFFVNG------NNWANI--EAGSNPDTIRRMRADGHLVGSHTYAHPDL------------------NTLSSADRISQMRQLEEATRRIDFAPKYMRAPYLSCDAGCQGDLGGL------------------------------GYHIIDTNLDTKDNKPETTHLSAEKFNNELSVGANSYIVLSHDVQTVVLTQKLIDTL |
7 | 3s6oA | 0.13 | 0.11 | 0.82 | 0.82 | MAPalign | | VQFVLNYEEGEYGSAGVWRILREFDKRGLPLTVFGVGMA----------IE---RHPELARAFVELGHEIACHGWRW----------IHYQ--------DMTPEREAEHMRLGMEAIERVTVRPLGWYTG--RDSPNTHRLVAEYFLYDSD---------HYGDDLPFWMDVEVVPQLIVPYTANDMRFADHFFHYLRDAFDVLGDEAPKMMSIGMHCRLGFRALQRFLDHI |
8 | 6hm9A | 0.13 | 0.09 | 0.71 | 0.69 | CEthreader | | VGLTIDD---AWGNEYLPRILEILKKHDVKATFFLEGRWVKEN-------------LRFAKMIVDANQEVGNHSYTHPNMKT------------------LSSDEIRDQLQKTNRMIEAANQKVRWFRPPSGSFRDEVVKIADDFQMGTIM------------------------------WTVDTIDWKRPEPDVLLQRVMRKI---HPGAIVLMHPTSTTEALDTMITKL |
9 | 4m1bA | 0.15 | 0.10 | 0.71 | 0.74 | MUSTER | | VAFTFDI---SWGDKKAIPILDTLKERDINATFFLSAAWA-------------ERHPDVVERIIKDGHEIGSMGYNYTSYTSL------------------ETNEIRRDLLRAQDVFTKLGVKIKLLRPPSGDFNKATLKIAESL------------------------------GYTVVHWSNNSNDWKNPGVNKIVSTVSNNL--KGG-DIVLLHASDSNKALPLLLQKL |
10 | 3rxzA | 0.16 | 0.13 | 0.81 | 1.96 | HHsearch | | VAFTFDDAESPLLLVGVPRLLGILDEFNVPGTFFVPGYTAH-------------RHPEPIRSIARAGHEIAHHGYLHESLVG------------------ADEDTERKILTRGIEALEEVGVHPVGYRAPWEN--WHTPKLLAEGFLYDST------L---DSDHP-YELAVGDGSLVELPVSWALDDWQIETPAKAIELWRAELRDIGGAWVLTNHPFLSAAALREFIAEV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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