Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TYRTAQICLNGHEITTSANTSPELMENFCSKCGAATITNCPICNTPIRGSYHVEGVLSLGHEYKIPSYCHNCGKPYPWTKTALESANALIEEDENLNSDEKKQFCETLPDLIVESPTPKTQLATARFKRLISKAATYTTDGVKGIIVNIASEAIKKS |
1 | 5cwdA2 | 0.09 | 0.04 | 0.43 | 0.78 | DisCoVER | | ---ARFCE-AAARAAESN-----DEEVAKIAAKA-CLVAKPTKE-AARSFCAAKRAAKVEIAKKACKEVAKQAGMPWL------------------------------------------------------------------------------- |
2 | 4a01A | 0.06 | 0.04 | 0.75 | 0.83 | DEthreader | | ------------WLLVSKVKLSACAEIQNA-I-SEGATSFTEYK--------LVSGGIA-FITASG---DVINGDNGDIAGMGSDLFGSYAESSAPLFLCVAVGLWAGLIIGVTTG-----I--IAVAALGM-L---S--TIATGLAIDAYGPDAND |
3 | 6fndA | 0.13 | 0.12 | 0.96 | 0.49 | CEthreader | | SYIGDDDLFSTNVRREVYGWLFTCQCVRCAAVDNARGFRCPLCGTGAMFFKTEDG-------ETTSSACTICQAFPTQETIQEYLDFEQAYVDRLAETDKSDVPDAELVYNQATQHWVLYQLHTILFEGYRDAGNSESASFHQMERIYVSQVMPLAS |
4 | 2dh4A | 0.07 | 0.06 | 0.89 | 0.58 | EigenThreader | | NEELINL-----HRGQGLDIYWRDFEMYLNMVMNKTGGLF-----RLTLRLMEALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLPIVHALNFTKTQTEQHNEILRILLLR------TSDKDIKLKLIQILEFDT-NSLAYTKNFINQLVNMIKNDN |
5 | 2x1gF3 | 0.10 | 0.06 | 0.59 | 0.37 | HHpred | | ------------------------------------------------------------ATLGLKELCRDCQLQLPYADPLLNACHASLNT-GRMKNSDSVRLMFSIGKLMSL--LRP-EEIPKYLDIIVSPCFEELQAICRIRTINMISTLFSS- |
6 | 4kblA | 0.14 | 0.13 | 0.97 | 0.48 | MRFsearch | | --AKPVRCKCGRQFCFHDPVKCKWLKKWIKKCIAANTKECPKCHVTIEKDGGCNHMVCRNQN-CKAEFCWVCLGPYMNHMQSLRFEHKLYAQVKQIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEK-- |
7 | 5va4A | 0.11 | 0.08 | 0.69 | 0.52 | FFAS-3D | | --------------------------DHCAHHGEKLVLFCQQDGNVI---------------------CWLCGHQTFLVEEVAQKYREKLQVALEMMRQKQKDAETECNQVAKRVALIARGKACGEQTQSVRVLISDLEHRLQGSVMELVDGVIKR- |
8 | 1ls4A | 0.12 | 0.11 | 0.94 | 0.64 | SPARKS-K | | -----RPDAAGHVIAEAVQQLNHTIVNAAHELHETLGLPTPD-----EALNLLTEQANAFKTKEVTTSLKQEAEQGSVAEQLNAFARNLNNSIHDALQDQLNSLQSALTNVGHQWQDISAQEAWAPVQSALQEAAEKTKEAAANLQNSIQSAVQKPA |
9 | 3wozA | 0.12 | 0.07 | 0.59 | 0.51 | CNFpred | | ----------------------------------------------------------------VAEVLNRCASNWSERKEGLLGLQNLLKNQRTLSRIELKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADL |
10 | 3ug9A | 0.04 | 0.03 | 0.76 | 0.83 | DEthreader | | -----RMLF-------------------------NGQCF----CLAW-LKSNG--TNAEKLAANEFAVIYSSNTVWLRYAEWLLTCPVILIHLSNRTMGLLVSDIGTIVWGTTSVRVIFFLMGLCYGIYTFFNAAALFFVSWGMFPILFILGPLSVY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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