Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | IRVYVGLDTAPTPEERIDLVLAELERTGAFDRSTLVLIPTTGTGWVNPTAARAMELVHNGDLAMVAWQYSYLPSWISFLADREKAAAAGKMLVERVHERWSQLPEDDRPDLFLYGESLGTQSGEGAFDSLAEIRAQMDGVLWVGPPNSNRLWRQLVERRDPGTTEVQPVYADGLVVRFADSREAIHEPETPWLSPRVLYIQHASDPVVWWSPDLLFSRPDWLSEPPGRDRLPQMRWFPFVTFWQVSADLTNAAGVPDGHGHNYGSAVLEGWIAVTQPEGWTENDTERV |
1 | 2czqA | 0.11 | 0.07 | 0.63 | 0.72 | DisCoVER | | AT-------------------------SSACPQYVLINTRGTGEQSA-GFRTMNSQITALSGGIYNTVYTA--DFS-QN-----SAAGTADIIRRINSGLAAN---PNVCYILQGYSQGAAATVVALGTSGAAFNAVKGVFLIGNPD-------------------H-KSG--LTCNVDSNGTTRNVNGGSVPWSKTLDVCAYGDGVCDT-----------------AH------------------GF--GI----NAQHYPSDVQTMGYKFAVNKLGG----S--- |
2 | 2vtvA | 0.06 | 0.05 | 0.82 | 1.00 | DEthreader | | LTCGTQTQY---APGVG-GGF-GG--GSCTATKTPVIFIHNGDNSFMPSVYAELKA-RGYNDEIFGVTLSSQGSAQYNY-HSSTKYAIIKTFIDKVKAYT--G----KSQVDIVAHSMGVSMSLATLQYYNNW-TSVRKFINLAGGGGFPWTGSGSTNS--------RDMPAKRT------------------AVSFYTLSAGKDQVGCATASFWAGCDSA-----QINVG---AGS-NATQA-DYDWADGMPAGGGDTHFRTTNTGAIIQRMLLTTCDCAA-EYTTG |
3 | 2fukA | 0.12 | 0.09 | 0.73 | 0.49 | CEthreader | | FPTESAALTLDGPVGPLDVAVDLPE-PDVAVQPVTAIVCHPLSSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR------PTDTLWLAGFSFGAYVSLRAAAALE-----PQVLISIAPPAGRWDFSDV------------------------------------QPPAQWLVIQGDADEIVDPQAVYDWLE----TLEQQPT----------------LVRMPDTSHFFHRKLIDLRGALQHGVRRWLPATP--------- |
4 | 4hvtA2 | 0.09 | 0.07 | 0.80 | 0.58 | EigenThreader | | FDKEATSFDGVIK--------------FDGKNPTLLEAYGGFQVINSRIKNEVWVKNA-GVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAM---TQRPELFGAVACEVPIFGAGHSWVTEYGDPEIPNDLLHIKKYAPLE----------NLSLTQKYPTVLITDSVLDQRVH-PWHGRIFEYVLAQNPNTKDSGHGSG-------------------SDLKESANYFINLYTFFANALKLKI--------- |
5 | 7cc4A | 0.17 | 0.11 | 0.64 | 0.50 | HHpred | | ------------------------------SYVIINTRGTSGPSVGFRTMNTRIRSAVSG-GSEYDTVYPAGIDQ-------NS-AQGTANIVAQVKAGLARNPN---TCFLLEGYSQGAAATCNALPQLTGAFDAVKGVILIGNPEHKPNLA-CNVDGNGGKTT---FSARGIS------AAFTQGVPSNWVS-KTLDICIYGDGVCDVSSGF--------G-----ITPQHLTYGYNVMGANFGIKALQ------------------------------------- |
6 | 4pscA | 0.16 | 0.10 | 0.61 | 0.40 | MRFsearch | | ----------DTITAACDLISDGEDAAASCGDVTVLFARGTVGVLVGPWFFDSLQTALGRTLGVKGVPYP--ASVQDFLSGSVQNGINMANQIKSVLQSC------PNTKLVLGGYSQGSMVVHNAASNLAATMSKISAVVLFGDPYYGKPVANF-------------------------------------DAAKTLVVCHDGDNICQLLPHLTYAE--------------------------------------------DADTAAAFVVPLVS------------ |
7 | 5x88A | 0.19 | 0.11 | 0.60 | 0.55 | FFAS-3D | | ---------------------NDLRDGPCKD---ITFIFARGSTEVGPDTCDELNREFRGRVACQGVGPRYEASLAGNFLPRGTTQAAIDEAAELFNLAHTKCPN---TQIVGGGYSQGAAVMHGAIPGLNAVKDQIKGVVLYGDT------------RNEQDGGRIPNFPTDKTNIICNPG-----------------------------------------------------------------DLVCDGTLILTAAHTYGTRVRGAVDWLED------------ |
8 | 5h6bA | 0.13 | 0.10 | 0.79 | 0.64 | SPARKS-K | | ---------------TSRGWNDYSCKPSAAHPRPVVLVH--GTFGNSIDNWLLAPYLVNRGYCVFSLDYGQFHGLG-------PIDKSAEQLDVFVDKVLDATGAP---KADLVGHSQGGMMPNYYLKFLG-GADKVNALVGIAPDNHGLGLTKLLPFFSDNTPGLADQVAG------SPFITKLTAGGDTVPGVRYTVIATKYDQVVTPYRTQY------LDGPNVRNVCPVDLSE----------HVAIGTI---------DRIAFHEVANALDATPTTCASVI-- |
9 | 4gxrA | 0.10 | 0.08 | 0.76 | 0.87 | CNFpred | | ------------LVARAGRVANVLVARGLQVGDRVAAQTEM----SVEALVLYLATVRAGGVYLPLNTA---------------TLHELDYFITDA-----------EPMIVVCDPS--------MRDGIAAIAAMVGATVETLGPDGRGSLTDAAAGASEAFATIDRGADDLAAILYTSGT---------TGRSMGAMLSHD------NLASNSLTLVDYWRFTP----DVLIHALPIYHTHGLFVASNVTLFARGSMI-TVLMGVPTFYTRLLQSPRLTMETTGHM |
10 | 2vtvA | 0.07 | 0.06 | 0.80 | 1.00 | DEthreader | | LTCTQTQ-----APGVG-GGF-GG--GSCTATKTPVIFIHGGDNISFDSVYAELKARGYNDCEIFGVTLSSSEQGSAQYNYHSTKYAIIKTFIDKVKAYT--G----KSQVDIVAHSMGVSMSLATLQYYNNW-TSVRKFINLAGGGGFFPNPWTGSGS--------R-DM-PAKR----------------TAVSFYTLSAGKDQVGCA---TA-SFWAGC-S---VGAGSNATQADYDWADGMPAGG--G-DTTNGVGHRTTNTGAIIQRMLLTTC---C-AEYTT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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