Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | TKGQLEAEIGNALIQFEKDYMGRGPQETKTFIIEDMILIRLKGVLTPAEQQLAKNPEGMNLIKMVRSNLLEQGRDLLTNVIEKITGFKVITLHTDISTKTGERMIVFTLNK |
1 | 3cfrA | 0.03 | 0.03 | 0.86 | 1.00 | DEthreader | | NTTTFGQMALQWIERKVNEYLNAFVLYGDT--------DSIYVSADKIIDKVGEFDHWVDFLDKFAREREPAIDRGFREMCEYMNNKQHLMFMDREAIALNVME------- |
2 | 2j3tB | 0.10 | 0.09 | 0.87 | 1.00 | DEthreader | | ---REELDVLKFLCDLWVAVFQKQMDSLRTNHQ---GTYVLQDNSFPLLLPMASLQ-YLEEAPKFLAFTCGLLRGALYTL-G-----IESVVTASVAALPVCKFQVVIP-K |
3 | 4ar1A2 | 0.11 | 0.09 | 0.81 | 1.00 | DEthreader | | ---KNPNEIYSEISEVAK------LKDAKSEVKKSTFTLRGS-YTG-G--VS--K--GKLEDQKAMNKFIDDSLKKLDTY-SW--SGYKTLTAYFTNYKTYDVVFHGYLP- |
4 | 3cfrA | 0.06 | 0.05 | 0.89 | 1.00 | DEthreader | | PTQMALQWIERKVNEYLNEVCGTEAFVLYGDT----DSIYV-SADKDKV-GE-SKFRDTNHWVDFLDKFAREREPAIDRGFREMCEHLMFMDREAIAGPGGFLVME----- |
5 | 2mraA | 0.08 | 0.05 | 0.68 | 0.77 | DisCoVER | | -------------------GKELRVEIKIDCGKQGCKRVKIRFEKKGL--------------DDDARKKAKKWALEVANKIANE--LGAKQSTTTTDGDTFEVEVILELE- |
6 | 3cfrA2 | 0.05 | 0.05 | 0.88 | 1.00 | DEthreader | | LTQMALQWIERKVNEYLNEVCGTEAFVLYGDT----DSIYVSADKIDKV-GE-SKFRDTNHWVDFLDKFAREREPAIDRGFREMCEHLMFMDREAIAGGGFLN--E----- |
7 | 1xkoB | 0.08 | 0.08 | 1.00 | 0.70 | CEthreader | | MDARIVNALIGSVYETIRDVLGIEPLVTVIGITGGSLIYSFSSETALKVVSAMMGGMEYNQLDELALSAIGELGNMTAGKLAMKLESFGVILKLPISVFSEDFDLHLSVKS |
8 | 5ujcA | 0.08 | 0.07 | 0.95 | 0.65 | EigenThreader | | -EMSHAESIKRVVDQKLS----SHEGFESHMFKISTMALLSTMFDVAFRKWVVQKTMDFGVCEMVIQSFLEDRLEIMSEKLRKVEENFEILHDYSLHYGGHFAFRSVLIFP |
9 | 1l2fA | 0.14 | 0.14 | 0.95 | 0.26 | HHpred | | SKEEVIPILEKALVSAYRKNFGN-SKNVEVVIDRNTIKVYQLLVVDSLEEALNVKNFGRIAAQTAKQVLIQRIRELEKEKQFEKYGTVTTAEVIRVG---E-WADI-RIGK |
10 | 4mtnA | 0.16 | 0.15 | 0.98 | 0.47 | MRFsearch | | -KEIVFEGVEQAILSAARKHFGE-EEVIEVHIDRSGQPVKTNGREIDRDELGDILGRISAQTKQVIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEGSANERIRAVVLEV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|