>PF10036 (249 residues) FERYLTALQFPRVGQLNIDDPKDFRSFVMWLEDQKIRFLPIEERQPLRKINAPDEWNRAY EKYKKDIKVPEHLKTKHEEVAWLLLYAIRLEYTDNAEQYRPLTGARKLQQESKKTNAPEV QSSNPFDSFDFTSADFEEGSWKLAERLGISYHPDHLVSLQAAAKVIKGAYNKEALKEPPP IAGQASFPIAQGSGMGLEKDQDLEQCARILRLLQIQNLRTLQTTINETIVSVQNVTADPR TDTKLGKVG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | FERYLTALQFPRVGQLNIDDPKDFRSFVMWLEDQKIRFLPIEERQPLRKINAPDEWNRAYEKYKKDIKVPEHLKTKHEEVAWLLLYAIRLEYTDNAEQYRPLTGARKLQQESKKTNAPEVQSSNPFDSFDFTSADFEEGSWKLAERLGISYHPDHLVSLQAAAKVIKGAYNKEALKEPPPIAGQASFPIAQGSGMGLEKDQDLEQCARILRLLQIQNLRTLQTTINETIVSVQNVTADPRTDTKLGKVG | |||||||||||||||||||
1 | 1eq1A | 0.08 | 0.05 | 0.57 | 0.68 | DisCoVER | FEEMEKHAKFQKTFSEQFNS---------L--VN--SK-------------------------------------------------------------------NTQ---D--FNKALKGSDSVLQQLSA----FSSSLQGAISDANGKAKEALEQARQNVEKTAE-ELRKAHP-DVEKEANAFKKLAVQKLAKEVASNMEE-TNKKLAPK------------IKQAYDDFVKHAEEVQKLHEAA-T- | |||||||||||||
2 | 1v7vA | 0.04 | 0.03 | 0.80 | 0.83 | DEthreader | -----M-----KYGYFDND-NREYVI--WTNYLGTEFCYNVPKEAEIWDVVIDAAFAAIKAHWDE--RCAKFQVKDTNAWTLYQAETCVVWSRFAEVGGRTGLDDWNDCLNL-GGGESSACELWYNAVGEQAMDAVDEHLFS--P--YG--------L---H--LN--APSF-----NDDIGFVTRVQGVKEF-----KRIAVRANHPWTGTSGWAYFAVTNYLVQVRQWATYHI---LNGAPIQGIP- | |||||||||||||
3 | 3zdrA2 | 0.09 | 0.07 | 0.83 | 0.51 | CEthreader | ------------VMTVPKHVTADTGMDVLTHAIEAYVSNMANDYTDGLAMKAIQLVFEYLPRAYQNGA-DELAREKMHNASTIAGMAFANAFLGINHSLAHKLGAEFHIPHGRANTILMPHVIRYNAAKPKKYFKADQRYAEIARMLGL-PARTTEEGVESLVQAIIKLAKQEACGVSKQEFESKVEKLAELAFEDQTTANPKLPLVSDLVHIYRQAFKGV---------------------------- | |||||||||||||
4 | 2vglB | 0.08 | 0.08 | 1.00 | 0.70 | EigenThreader | RALAVRTMGCPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMDSLRDLIADSNPMVVANAVAALSEISEALNECTEWGQIFILDCLSNPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFIMIRLASQAQVLAELKEYAVRKAVRAIGRCAIEAIVVIRDIFRKYPNESFLEGFHDESTQVQLTLLTAIVKLFLKKELVQQVLSLATQLRDRGYIYWRAKEVVLTLLDELICHIGSLASVYHKP | |||||||||||||
5 | 2ve7B | 0.13 | 0.10 | 0.76 | 0.41 | HHpred | LCEFLTENGYAHNVSLQAPSVKDFLKIFTFLYG----FLCPS----Y-ELPD-TKFEEEVPRIFKDLGYPFALSHIVAALVWLIDCIKIHTAMKESS-WG----E-------------------ETEDGIMHNKLFLDYIKCYESFMSG--ADSFDEMNAELQSKLKDLFNVD--AFKLESLEAKNRALNE------Q-IARLEQERSTANKANAERLKRLQKSADLYKDRLGL--------------- | |||||||||||||
6 | 1eqfA | 0.10 | 0.08 | 0.79 | 0.50 | MRFsearch | --VHCDYLNRPHKSIRRTDPMVTLSSILESIINDMRDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLELDNIVTQKMMAV---------------PDSWPFHHPVETIRKNISKHKYQSRESFLDDVNLILANSVKYNG------------------------PESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEA----------- | |||||||||||||
7 | 6rn5A | 0.13 | 0.12 | 0.90 | 0.77 | FFAS-3D | LRAQATEF--LRALRLHREPVEAARALRRSA--RRISA-TLHTFQSLLDTDWCEGMRPELAWVSGTLA---MEHAYTARLERLLNALHRLSGLTVGAAKAGALLDRQLTLARTRAHSTALQA--------MGSSRFHAIADKVAVLASEVPLTPAAATARPLATAAKDRLTDAVAALPLITAALIHGLSPDTVP--HPQDAPWHQVRLLLRLHRYLRLLSAGQALRDASEAAAQAARTPRIA------- | |||||||||||||
8 | 6w2qA | 0.13 | 0.10 | 0.73 | 0.65 | SPARKS-K | LKRAEELAKSPD--------PEDLKEAVRLAEEVVRER---------PGSEAAKKALEIIQEAAELLK---KSPDP-EAIIAAARALLKIAATTGAKQAIEAASKAAQLAEQRG-----------------DDELVCEALALLIAAQVLLLKTSDEEVAEHVARTISQLVQRLKRKGA--------------------SYEVIKECVQRIVEEIVEALKRSEDEINEIVRRVKSEVERTL--------- | |||||||||||||
9 | 2x19B | 0.14 | 0.10 | 0.73 | 0.64 | CNFpred | LPLVLHALGNPE-------LSVSSVSTLKKICREC--------KYDLP--PYAANIVAVSQDVLMKQIH--KTSQCMWLMQALGFLLSALQVEEILKNLHSLISIQQLEKLAEEIPNPSNK-----------IVHILGLLSNLFTTLDISHH-PVVVVLQQVFQLIQKVLSKWLN-----------------------DAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYS------------ | |||||||||||||
10 | 4c2mA | 0.06 | 0.04 | 0.80 | 0.83 | DEthreader | CYNPLFF-NQLYIYLRKKIFETYILSTEVKFMDVVTSLRDNDDLSK-----RRVIFSRLMN-AF-----------V--TIQNDVNAFID---------V---L--LF-HMMGKRVNYAARSILRLHYNTGAYNTT-SPVRGQYGGIVSLHGPEVAAKVLSVLGRLFTNYITAT-AFTCGMDDLRLTNRTDLKTSVD----------AM-VKGKQEYYFHCMAGREGLIDTAVKT-SRSGYGEPSTQMTY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |