>PF10032 (185 residues) LNPQITNLLIILGMMQVSKRVPFDDPNVLNSVRAIYVTSNIIIALVYFYVQSKINAKNDM TTLKYVEPAPMGSTEEPKLVTTTIKDYDLAQLKTAWRGQLTGVAMMAFMHLYMKYTNPLL IQSIIPVKSLFESNLVKIHLYGQPASGDLKRPFKAAAGLMGAMQGGATQSDKKAVEAAEK AGRGG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LNPQITNLLIILGMMQVSKRVPFDDPNVLNSVRAIYVTSNIIIALVYFYVQSKINAKNDMTTLKYVEPAPMGSTEEPKLVTTTIKDYDLAQLKTAWRGQLTGVAMMAFMHLYMKYTNPLLIQSIIPVKSLFESNLVKIHLYGQPASGDLKRPFKAAAGLMGAMQGGATQSDKKAVEAAEKAGRGG | |||||||||||||||||||
1 | 3vvnA | 0.10 | 0.09 | 0.84 | 0.67 | DisCoVER | R-RLSIPMMIGMSVQTL--WVSES---LA--AVGLFFPVFMGI--IA-LAA-GL----GVGTSSAIARRIGARDKGADNVAVHSLILSLILGVTI---TITMLPAIDSLFRSMEAVELAIEYARVLLAGA--FIIVFNNV----GNGILRGEGDANRAMGMAAATTSVTGAAYGE-RGI--GEG- | |||||||||||||
2 | 6sp2A | 0.06 | 0.04 | 0.71 | 0.83 | DEthreader | AFILVQLVIIVDFAHSLAENWSAESRGYYYALAGVTLLCYILSLTGITLLYIYFTTST-G------------------------CGINKFFISINLIFCLAISVISI-P-----PHSGLLQSSLVTLYTVY--LTWSAVANGNWGNEASMWKIVSWLGVFIYGWS-------------------- | |||||||||||||
3 | 3mktA | 0.07 | 0.06 | 0.89 | 0.44 | CEthreader | AAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTK------------------GAAIAANVGLMTGLATACITALLTVLFREQIAAMQLLLFAAIYQCMDAVQV--VAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGF | |||||||||||||
4 | 3gtdA | 0.07 | 0.06 | 0.91 | 0.73 | EigenThreader | KQEFSGYITQIEYALERIEDALKKVYAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCHLPENEPGSSIMPGKVNP------TQVEALTMVCTQVMGNHVTVTIAGS---NKPVIIYNILQSIELLSDS--VNSFVTHCVK-----GLEIARINTLRDKSLMLVTVLNPHIGEAAKKLNFL | |||||||||||||
5 | 4f4cA | 0.17 | 0.15 | 0.86 | 0.29 | HHpred | --PTYSVFFTSFMNVFAGNPADFLSQGHFWALMFVLAAAQGICFLMTFFM--GIASERDLRKFRVSQHIGFDSPQNASGKISTRLATDVPNLRTAVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVA------FGQYLRGRRFTGKNVK---SA-SEFADS-------GKIAIEAIENV---- | |||||||||||||
6 | 1pw4A2 | 0.07 | 0.05 | 0.69 | 0.30 | MRFsearch | --TGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-----------------------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG----------------------------EKRRHEQLLQELVP---- | |||||||||||||
7 | 6es9A1 | 0.12 | 0.09 | 0.78 | 0.68 | FFAS-3D | --------------------MPADTPSLLALAGEALPELESLQSRATEALRALV--------------APAGKPQPALLEQHQHAAHALSWLTTYVESIRQLSGWAGRLAEAGNLGRIEALILQIGLGEYLG------QIAGGISQTEFARLSWQPGEAAAKLMRGNTAPARAELARLMQDNHG- | |||||||||||||
8 | 6w2wA | 0.12 | 0.12 | 0.95 | 0.81 | SPARKS-K | VNERVKQLAEKAKEIEIVKELASTDPNVVAEIVYQLAEVAELIKEILQEALRLAEEQGDEELAELEEARQLLSKDPE-------NE-AAKECLKAVRAALEAALLALLLLAKHPGSQ-AAQDAVQLATAALRAEAACQLAKQYPNSDIAKKCIKAASEAAEEARHPDSQKARDEIKEASQKAEEV | |||||||||||||
9 | 4u8yA | 0.06 | 0.04 | 0.64 | 0.79 | CNFpred | RATLIPTIAVPVVLLGTFAVLASINTLTMFGMVLAIGLLVDNAIVVVENVERVMAEE-----------------------GLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAIYRQFSITIVSAMALSVLVALILTPALC------------------------------------------- | |||||||||||||
10 | 4c3oA | 0.04 | 0.03 | 0.75 | 0.83 | DEthreader | RCGVCTGAHPNWLGVP-CA-INLDETAVNMERLNLVSSIIQKARQFCEVYLPDVLLIAYKWAGGSNLLGAIHPVKHMEALFSGRTAARALESVWAGNTLQYFFDRLMRNLKSGDTATA-------------AP-------------------R-G-ALGHWQCVVTWNGAEAA-MG--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |