>PF10023 (321 residues) GYLAQSVRGHFALLGEARPVAQWLDAADTPQALRERLALSQRIRDFAVSELKLPDNGSYR RYADLGRPAAVWNVVAAPELSLELKTWCFPVAGCVGYRGYFDQADAEAMAAQLRAEGYEV AVYGVPAYSTLGWFDDPLLNTFIHYPEGELARLIFHELAHQVAYAKGDTTFNESFATAVE RLGVQRWLETQADAQAREEYARFEARRQQFRTLTLGYREQLQALYRSRLAPEAMRRRKAE LMQRLRDEYETIKREQWGGFTGYDAWFERANNASLGVLAAYHDLVPAFERLFEAEGRDFA RFYAAVGRLARLPQEERRQAL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | GYLAQSVRGHFALLGEARPVAQWLDAADTPQALRERLALSQRIRDFAVSELKLPDNGSYRRYADLGRPAAVWNVVAAPELSLELKTWCFPVAGCVGYRGYFDQADAEAMAAQLRAEGYEVAVYGVPAYSTLGWFDDPLLNTFIHYPEGELARLIFHELAHQVAYAKGDTTFNESFATAVERLGVQRWLETQADAQAREEYARFEARRQQFRTLTLGYREQLQALYRSRLAPEAMRRRKAELMQRLRDEYETIKREQWGGFTGYDAWFERANNASLGVLAAYHDLVPAFERLFEAEGRDFARFYAAVGRLARLPQEERRQAL | |||||||||||||||||||
1 | 4p8qA3 | 0.11 | 0.07 | 0.61 | 0.72 | DisCoVER | ------------MKNLVSIY--A--VPEKIGQVHYALETTVKLLEFFQNYFEIQYLKKLDLVAIP---DF------------------------------------------------------EAGAMENW-GLLTFREETLLYDRKLVTKIIAHELAHQWFLVTMKLWLNEGFATFMEYFSLEKI-----FKELS--SYEDF---LDARFKTMKKD-------------------------------------SLNSSHPISSSVQSSEQIEEMFSLSYFKGSSLLLMLKTYLDVFQHAVVLYLHNHSYASI--QSDD- | |||||||||||||
2 | 1wgzA | 0.09 | 0.07 | 0.71 | 1.00 | DEthreader | LGALAAWDQRTMIPK--------------PYPVEAQRRFALELLSACG----YDLEAGRL-DP-T---A--------------------------------------------------------HPFEIAIGDVRITT-RYYEDFFNAGIFGTLHEMGHAYEGDAVSLGVHESQSRTWENLVGRSFWERFFLEDFHFAVNAVEPADVTYNLHILVRLELELALFR-GE---LSPEDLPEAWAEKYRDHLGVAP---------YKDGVMQDVHWLFYFPTYTLGNLYAAQFFQKAELFLDWTRARIHAEGSRFRRVLVERE | |||||||||||||
3 | 3ce2A2 | 0.09 | 0.09 | 1.00 | 0.72 | CEthreader | SYRHTFANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKKNSSLITKYFSIKQRCLNLKDFHFYDVYAPLSQEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWVDKGAYSSGCYDSHPYVLLNYTGT-LYDVSVIAHEGGHSMHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDIHHAAEVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIERIPHFYYNFYVYQYATGIIAALCFLEKILNNEDNALNSYLNFLKSGGSDFPLEILKKS | |||||||||||||
4 | 2o3eA | 0.08 | 0.07 | 0.83 | 0.82 | EigenThreader | NAWDLHYYMTQTEELKYS--------VDQESLKEYFEVVTEGLLSIYQELLGVWNKSVYTVKDKATGEVLGQFYLDLKYNHAACFGLQP---------GCLLP-------------DGSR---MMSVAFSQPVAGRPSL--LRHDEVETYFHEFGHVMHQICAQTDFARFSGVEVPSQMLENWVWDSLRKLSTDELLEKLVASRLVNTGLLTLRQIVLSKVDQSLHTNATLD-----AASEYAKYCTEIL------GGHLAGGYD----GQYY------GYLWSEVFSMDMFHSCIMNPEVGMKYRNLILKPGGDMLQNFL | |||||||||||||
5 | 3ce2A | 0.11 | 0.10 | 0.84 | 0.36 | HHpred | --KIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYNLIDIVKKYFSIKQRCLNL--------------------------KDFHFYDVYAPLSQ--E--KKYTFQEAVDLIKQGLTQGWDKYENLSGAYSSGCYDSHPYVLLN-YTGTLYDVSVIAHEGGHSMHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFYDIHHAPLTEEY----LSSTYKNLQNEFYGEII-TFDVLSNI-EWARFYYNFIIAALCFLEKNLNSYLNFLKS-GGFPLEIL---KKSGL-DMG------ | |||||||||||||
6 | 3ce2A2 | 0.13 | 0.10 | 0.79 | 0.33 | MRFsearch | --GKIQAHVFYAKNKRNSCLQAALYHNNIPTTVYTNLSLITKYFSIKQRCLNLKD-------------FHFYDVYA-------------PLSQE----KKYTFQEAVDLKQGLTTQGSHPYVLLN---------------------TLYDVSVIAHEGGHSMHSYFYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDIHHAAEHGVPL-----TEEYLSSTYKNLQNEFYGEIITNIEWARIYATGIIAALCFLEKILNSYLNFLKSIQKAFCFIEKKIQELSSL--------- | |||||||||||||
7 | 3sksA2 | 0.12 | 0.10 | 0.85 | 0.83 | FFAS-3D | --LVKVRTKIAKSLGFKNFVELGYARTDYNAEMVANYPVTTELRKRQQARIGVEKLAYYDENFEFPTG---------------------------NPTPKGDADWIVNHGKTMYKELLDLVAKAGGGYCTYIENKAPFIFSNFNGTSGDI-DVLTHEAGHIPEYNWPTYEACEIHSMSMEFF-TWPWMKLFFEEDADKYYFSHLSSALLFLPYGVSVDEYQHYVYENPEASPEER---KTAWRNIEKKY----------LPHSPFYYIDYTLAQICALQFWKRAREDYLELVEVANLTVKSVITEIEALHAIDDTK----- | |||||||||||||
8 | 5k7vA | 0.12 | 0.10 | 0.80 | 0.63 | SPARKS-K | IEEVVAEMIDILAESSKKSIEELARAADNKTTEKAVAEAIEEIARLATAAIQLA-----------------------------------------------SEEFMARAISAIAELAKEAIYRLADNHTT---------DTFMARAIAAIANLAVTAILAIAALASNHTTEEISAIAELAKKAIEAIYRLADNHT---TDKFMAAAIEAIALLATLAILAIALLASNHTTEEFMAKAISAIAELAKKAIEAIYRLADNHTSP-----TYIEKAIEAIEKIARKAIKAIEMLAKNITTEKEKAKSAIDEIREKAKEAIKRLE | |||||||||||||
9 | 3q7jA | 0.10 | 0.09 | 0.94 | 0.74 | CNFpred | GKGASILRMIEDYAGYEKGISKYLNDHNAGSDLWTAIEDGKPVKRVMEYWIK---NPGYPVIKLKRNRKITMYQTRFLLNGEEEGRWPVPVNIKK-ERILLE-------EASIEADGLIKINADSAGFYRVLYD-DATFSDVMGHLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITA-----IVGQMEYLRMLTHAFDDDARAFCRSRMQFLTG-KQDENLKIALGRVSRLYVMVDESYAEEMSKLFKDFDSAEPEMRSSIATAYALVTGDLKGLLEKFRSV--RDEDRVRIISAFGKLKSNTDLSTV | |||||||||||||
10 | 3o0yA | 0.08 | 0.06 | 0.73 | 1.00 | DEthreader | ALTSPVMQNDQPI-EK----------AGREELLSDINGYITEVTAKMAPVFRTTPSYQV-EVKSFPVEVQ-D-------------------------------------------------GAPGGQYTSPAGKPGIYWINLRMNLKTLTYHEAPGHWQIALNLLRAPYNAYTEGWALYSEQVAYELGMYENDPFGDLGRLQAELFRAVRLVVDTGLH-DK-------------------R--WTREQAISYMS-EQTGTAEDVVAEIERYMAWPGQALGYKLGMLKILSLREQAKFDLAEFHDVVLLNGAV-PMAVLSRV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |