Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | CEAARRTLLSQGYIIKQAKADLVDGHKHFQPDQDTHVEIEFHVVCAPNDKDGKSSTLFVSATQDRYALKKTNNSASVGLSVLGSVSLPIGSTSDSLVKVASETIPAGRFYDRFFGLIEHYL |
1 | 5of9A2 | 0.02 | 0.02 | 0.74 | 0.61 | DisCoVER | | ---------------------------LSCC--LYKPRMYKYTSEVAEDVKKRIKKQKELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQACGGVVGVVDVPYLVL--EPTHNKQD- |
2 | 1z45A | 0.05 | 0.04 | 0.85 | 1.00 | DEthreader | | IQATFAGASAHRFLPIIQNPFTAEYMLIDNEKDPGDLLVTIQYTVNVAQ-----KSLEIVYKGKLAGEATP-INSQINTLNLLSEPTRYAQNWKDTLKNGETYGS----K--IV--Y---- |
3 | 4rehA | 0.07 | 0.07 | 0.98 | 0.70 | CEthreader | | VPNITPANIQGCDLHEGEFGKVGSVVIWNYSIDGNAMIAKEEIVAIDE---EDKSVTFKVVEGHLFEEFKSIVFSVHVDTKGEDNLVTWSIDYEKLNESVKDPTSYLDFLLSVTRDIEAHH |
4 | 2ooyA | 0.09 | 0.07 | 0.79 | 0.60 | EigenThreader | | LLAVYRALQRAGAQFTVRSDMYTIKSRWEIKREGKNTYAYIELQLYEVG----CFMLDVKNGYKDI-----YS--------------HPERTADHGMDDLKSSFPFLDLCAMLVCKLF--S |
5 | 1xe0F | 0.15 | 0.11 | 0.69 | 0.24 | HHpred | | -------------------GCELKADKSFKVEDENEHQLSLRTVSLGASAKDELHVVEAEGINILASLKPSVQTVSLGFEITPPLRLKSGSG---PVYVSGQHLVA--------------- |
6 | 2v7yA | 0.10 | 0.07 | 0.75 | 0.78 | MRFsearch | | ----------------------TSKSQVFTTAADNQTTVDIHVLQGERPDNKSLGRFQLTGIEVTFDIDA------NGIVHVRAKDLGT--NKEQSITIKSSSGLSEEEIQRMIKEAEENA |
7 | 1txcA | 0.15 | 0.14 | 0.97 | 0.51 | FFAS-3D | | -AKLYKALTKDSDTIAQKIDGPIQSIELVEGNGGVGTIKKITAN---EGDKTSFVLQKVDAIDEDYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKRDDALAKGAGFFKAIEGYV |
8 | 2pz1A2 | 0.10 | 0.09 | 0.92 | 0.71 | SPARKS-K | | ------EDWEGEDLLVRSSELIYSGELTRVTQPQRMFFLFQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVKNAFRLHRGATGDSHLLCTR----KPEQKQRWLKAFARER |
9 | 1xcrA | 0.14 | 0.13 | 0.92 | 0.81 | CNFpred | | NKIAKEIKLPGAFILGA-------GAGPFQT--GFNSEFMPVIQTESEHKPPVNGSYFAHVNPGGCLLEKYSECHDFQCALLANLFASEGQ-PGKVIEVKAKRRTGLNFVTCMRETLEKHY |
10 | 2ooyA | 0.06 | 0.05 | 0.78 | 1.00 | DEthreader | | ILAVYRALQRAGAQFTVPDMYTIKSRWEIKREG-KNTYAYIELQLYEVM--PGCFMLDVKSGYKDIYSHP---ERTA-DHG------------------DLKSSFFLDLCAMLVCKLFS-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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