Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | GFRDKPLRVRFRILDPKLALLPTNTDQDITLTQATFARLEIPVTKIFITENEINFLAFPEVPEAMVIFGAGYGFENMASVEWMRDRVIHYWGDIDTHGMAILNQLRRFFPQAASLLMDHETLMEHQPLWGAEPSPETGTLTRLTAQEGALYDQLRRNELGSRIRLEQEKIGFEWLVEAL |
1 | 1d3yB | 0.12 | 0.11 | 0.95 | 1.33 | DEthreader | | -LRPEEDGSSVVG-P--LKIIVVDCKLAYNIPNDVTKLNLETADFILAIETSGMFARLEFWHNCILVSLKGVPARARRFKRLHEDLPVLVFTDGDPYGYLIYRTLKVSIPAARLIGVTPQDIIYDL-PTHPLKEDRIDGDDFVFPEWQKALKQMLDMG----VRAEQQSLVVTYLPEKI |
2 | 1d3yB | 0.11 | 0.11 | 0.96 | 1.33 | DEthreader | | LRIPEEDGSSVVG-P-LKI-VVDCKLGAYNIPNDVTKLNLETADFILAIETSGMFARLFDKHNCILVSLKGVPARARRFIKRLEDLPVLVFTDGDPYGYLIYRTLKVSIPAARLIGVTPQDIIDYDLPTHPLKEIKRDGLKDVFPEWQKALKQMLDMG----VRAEQQSLVVTYLPEKK |
3 | 1d3yB | 0.12 | 0.12 | 0.98 | 1.75 | HHpred | | -SVVGPLKIIEETPEGEVVDCTKLGTGAYNIPN-DVTKLNLDADFILAIETSGMFARLNAEHNCILVSLKGVPARATRFIKRLHDLPVLVFTDGDPYGYNIYRTLKVGIPAARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDLKNRSFPEWQKALKQMLDMGVRAEQQSLAKYYVVNT- |
4 | 2q2eA2 | 0.11 | 0.10 | 0.92 | 0.88 | DisCoVER | | ------DGATMFGPI--EITEQTHCQVEGGYQIPFNVNIEHDASMIIAIETGGMYLNGFDEYNAILVHLKGQPARSTRRIKRMNEIPVAVFTDGDPWSYRIYASVAYMTPAAKFLGLQPSDIVEL--STDKLTEQDVALELFESDYWKEQIQLQLD----IGKKAEQQAFVTVYLPNR- |
5 | 2q2eA2 | 0.11 | 0.11 | 0.98 | 0.85 | MRFsearch | | ---TMFGPIEITEQTKRGHCQK-VGEGGYQIPFNNIEFQKHDASMIIAIETGGMYARLMENYNAILVHLKGQPARIIKRMNEELGIPVAVFTDGDPWSYRIYASVAYGAPAAKFLGLQPSDIVEYELSTDKLTEQDVSALRSELRFESDYWKEQIQLQLDIGKKAEQQAFAEVYLPNRL |
6 | 1d3yB | 0.13 | 0.13 | 0.98 | 0.97 | SPARKS-K | | IPEEDGSSVVLKIIEETCTKLGTGA---YNIPN-DVTKLNLEADFILAIETSGMFARLNAERNCILVSLKGVPRATRRFIKRLHDLPVLVFTDGDPYGYLIYRTLKVSIPAARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDGLKNDFPEWQKALKQMLDMGVRAEQQSLAKYYLPEKI |
7 | 1d3yB | 0.13 | 0.12 | 0.95 | 1.32 | MAPalign | | -----EDGSSVVGPLKIIEETPEGELTAYNIPNDVTLNLETDADFILAIETSGMFARLRFWDNCILVSLKGVPARATFIKRLHHDLPVLVFTDGDPYGYLIYRTLKVSIPAARLIGVTPQDIIDYDLPTHPLIKRIKDGLDFVRPEWQKALKQMLDM----GVRAEQQSLVVTYLPEKI |
8 | 1d3yB | 0.13 | 0.13 | 1.00 | 1.18 | CEthreader | | GFIPEEDGSSVVGPLKIIEETPEGELVYNIPNDVTKLNLETDADFILAIETSGMFARLWDKHNCILVSLKGVPARATRRFHEEHDLPVLVFTDGDPYGYLIYRTLKVSIPAARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDGFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVV |
9 | 2q2eA2 | 0.12 | 0.12 | 0.97 | 0.81 | MUSTER | | AT-----PIEITEQTKRCQKVGEGGYQ-IPFNVENIEFQKHDASMIIAIETGGMYARLDEAYNAILVHLKGQPARSTRRIIKRLGIPVAVFTDGDPWSYRIYASVAYATPAAKFLGLQPSDIVEYELSTDKLTEQDVSALRSELSDESDYWKEQIQLQLDIGKKAEQQFVTEVYLPNRL |
10 | 1d3yB | 0.12 | 0.12 | 0.99 | 3.11 | HHsearch | | SSVVGPLKIIEETPEGEVVDCTKLGTGAYNIPN-DVTKLNLDADFILAIETSGMFARLNAEHNCILVSLKGVPARATRFIKRLHDLPVLVFTDGDPYGYNIYRTLKVGIPAARLIGVTPQDIIDYDLPTHPLKEQDIKRIKDLKNDSFPEWQKALKQMLDMGVRAEQQSLAKYYLPEKI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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