Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LKSYLLTAIVFFAIDLVWLGVVAKNLYNKHLGGLLADQVNWTAAIIFYLLFIVGIYIFAIVPAVNKESLKYAIMMGALFGFFTYATYDLTNLATLKDWPIKIVFIDIIWGSVLTAAVSASGY |
1 | 4xu4A | 0.03 | 0.03 | 0.96 | 1.17 | DEthreader | | ISEAVVLFLLGAVAALIGDHSHVVTGTT--V--YHTDAFSPFWFPILVGAATASLAELRLHLP-APRLGDGPGAACGVVIAVIGPAVEIALVQLGVAYDGLVAPFLAPLYFAFGVVAALLGE |
2 | 4xu4A | 0.03 | 0.02 | 0.94 | 1.00 | DEthreader | | ISEAVVLFLLGAVAALIGDHSHVVTGTT--V---YHTDFSPFWFPILVGAATASLAELRLHL--PAPRGDGPGAACGVVIAVIGPAVEIALVLVFAYHDGLVAPFLAPLYFAFGVVAALLGE |
3 | 6xe6A | 0.12 | 0.11 | 0.93 | 1.00 | DEthreader | | CMITLMTMFAIIS-SLIVSYFLYRVVFHF-EF--F-PFMNLTALIILVGIGADDAFVLCD-VWNTKETVSITLQAALSMFVTSFTTAA-AFY-NYVSRCGVYGTAIL-VNYVLMVTWLPAVV |
4 | 6d4hA | 0.08 | 0.07 | 0.95 | 1.00 | DEthreader | | MQGA-VG-LAGVLLVALSVA-AGLGLCSLIGISFNTTQVLFLALGVGV-DDVFLLAHAFSETGQNKRPEDRTGECLKTGASVATSI-NV-AFALFSLQAAVVVVFNFAMVLLIFPAILSMDL |
5 | 6bhpA | 0.12 | 0.11 | 0.95 | 0.62 | DisCoVER | | -FIYVGLVISQL-LTLAAYVVVT-AGAALLQKKALTLEVFTATT-YIWWIIQFETAACTVFPSIIKRMRPVALTFIASALVLVMDNINAIFFLLVFDRIATAQAGLI-MVGVANGLTIFFL- |
6 | 6tbuA | 0.11 | 0.11 | 0.96 | 1.00 | DEthreader | | LTGSAFITLMSCVAICFSLG-LAYFFYAVLEFEFFPMNLAVVVIIGIGADDVFLFLKIWHCV-LTE-SLENIMATMRHAAASMFVTSLTTAGAFYAYGI--TVVTNYLLMITWLPASVSIME |
7 | 6akfA | 0.12 | 0.12 | 1.00 | 0.52 | CEthreader | | MGLEITGTSLAVLGWLCTIVCCALPMWRITWEGLWMNCVLPQDLQAARALIVVSILLAAFGLLVKAKITIVAGVLFLLAALLTLVAVSWSANTIIRKREMGAGLYVGWAAAALQLLGGALLA |
8 | 2o1oA | 0.08 | 0.07 | 0.91 | 0.70 | EigenThreader | | KP-----------VIEYYLNCIDYNVLVLISSLSSAYELIVMKIQKIYNESIFFTVLGQHLDLSYFDLSERYFSMVEMKTRYTFYMPVFFGLTLSEIQSSAQLNLIEAILYKLGEFYQVHND |
9 | 5n6mA1 | 0.09 | 0.07 | 0.74 | 0.22 | HHpred | | -----------------------PGHLLALAAGALTAPFDYWPLA--I--LSIALLYLGLRG----LPGKSALWRGWWYGFGAFGASWIYVIHDYGAASVPLASLLMAGVAFFFALPAWLW- |
10 | 5i20A | 0.11 | 0.11 | 0.97 | 0.27 | MRFsearch | | --VWVHGIGGLFGYHFFYFSALLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGARAGGFAPEYVPGYLAAAACAVIWSVYSVASRRFA-RVPTEVVAGFCLATAALSALCHILF- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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