>PF09937 (283 residues) RVVVVKGTFDLVPDGPARLRPEPDMPSGDVHLDGDPARSLLYPSDFAIFKPRTDVTLTGN AYAPGGGAPAAQVRFRFGRGSAGFERKIAVFGERRWERAVVALAPTAPRPFTSLPLVHEH AYGGPGFDANPVGVGRAPGPDGATRLPSLEDPERLIRDPTDTPAPVGFGPVPARWSRRTQ MLGTYDARWRVERWPWFPEDFDWAYFQAAPPAQQLDAVRGDESFALEGMRPDIPLLEGRL PGVRARAFAQRTREAGSELLEVLLRLDTVHFDVEAMKLDLVWR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | RVVVVKGTFDLVPDGPARLRPEPDMPSGDVHLDGDPARSLLYPSDFAIFKPRTDVTLTGNAYAPGGGAPAAQVRFRFGRGSAGFERKIAVFGERRWERAVVALAPTAPRPFTSLPLVHEHAYGGPGFDANPVGVGRAPGPDGATRLPSLEDPERLIRDPTDTPAPVGFGPVPARWSRRTQMLGTYDARWRVERWPWFPEDFDWAYFQAAPPAQQLDAVRGDESFALEGMRPDIPLLEGRLPGVRARAFAQRTREAGSELLEVLLRLDTVHFDVEAMKLDLVWR | |||||||||||||||||||
1 | 2oa2A | 0.05 | 0.02 | 0.41 | 0.64 | DisCoVER | -VTD---------------------HGPRPFVVNIEDETKAFRRALWTGDHLQV-TLSI----------------------------QVGEDIGLEIHPHLDQFLR---------VEEGRGLVQGHEEVFDDYAILIP-AGTWHNVRNTG----NR--------PLKLYS-------------------------IY-----A--PPQH--------------------------------------------------------PHGTVHETKA--IAA--- | |||||||||||||
2 | 6y55A | 0.09 | 0.05 | 0.62 | 0.67 | DEthreader | --------------------------------KRIY-YLSL----------------EFYMGRTLEIEEDAGLGGGLGRL---CFLGGIRYEFG----------A-DLRGNPWEK----F-LPVHFYGTQVVLAAKAPNDFVRNEISRVLYPND------KELRKQEVHPSLAIPEMIIEINQRNRAAFPGDVDRLRRMSLVERINMLCGSHAVNGVARIHSTNGITWRVSLAITGNGANVRVEVDR------------DQ-----------------F---- | |||||||||||||
3 | 2ce8A | 0.04 | 0.04 | 0.96 | 0.64 | CEthreader | NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ----------QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV | |||||||||||||
4 | 3q6kA | 0.06 | 0.05 | 0.79 | 0.68 | EigenThreader | DNMISTAFAYDAEGEKLFAVPRKLPRVPYKNSLGVKGKHSPLLNKFGKELTSIYQPVIDRYYFPTRLVEKYFGGFAVDVANPCSETFVYITNFL-------------RGALFIYDHKKPTFKA---------ERPTG-----KFKAGIFGITLGDRDSEGNRPAYYLAG---------------SAIKELK-------QKGGK-----------LNPGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLKNTDVVYTSVFGTDISVDKGGLWFMSNG | |||||||||||||
5 | 2bihA | 0.12 | 0.06 | 0.51 | 0.32 | HHpred | ---------------------------DDRWWKDNLQTIICKPENQQVIKISDEYEIAGFGYNGGG-VRIGRIEVSLDKGKS-WKL-ADIDYPSCLCWCFLKVPLSEARSKD----ILIRGMDERMMYWNVTSMLNNWWIREG-ESLRFEHPV-----------VAN--K-PGGWMDRVKAEGGDILNWGEV------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2ce8A | 0.14 | 0.08 | 0.57 | 0.57 | MRFsearch | ---KPAYSFHVTADGQMQPVP--------------------FPPDALIGPGIPRHARQINTLN----HGEVVCAVTISN----PTRHVYTGGVKVWDISH----PGNKSPVSQLDCL---------------------------------------------IRSCKLLPD----------------------------------------GCTLIVGGEASTLSIWDLAAPTPRIKAELTSPACYALAISP--DSKVCFSCCSDGNIAVWDLHNQTLVRQFQ | |||||||||||||
7 | 6f1tg | 0.09 | 0.08 | 0.95 | 0.36 | FFAS-3D | ----------LTEEEKQQILHSEEFLIVERALSEQINIKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALV-----WNMKYKKTTPECQSAVMSATFAKFHTYSGQDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSVNNFVVGSEEGSVYTHCHAAVGAVDFSHLFVTSSFDWTVSTKNNKPLYSFEDWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVALNRVRWTHSGREIAVIYD | |||||||||||||
8 | 4fj6A2 | 0.10 | 0.09 | 0.86 | 0.94 | SPARKS-K | AAFRIPGLVTT-NNGTL-------LGVYDIRYNSSVDLQEK--------------IDIGVSRSTDKPRVATVGDPSILVDEK--TNTIWVVAAWTHGGNERAWWNSPGTPDETAQLLVKSEDDGPSWYFLLQGPGRGITQDGTLVFPIQFIDAHLHNLARTNTTEAQVAEVEPG------VLLNRDN---RGGSRAVHPSSRSALESVCASLIKVNANITGDLLLFSNPNTTKGR-------NHITIKASLDGGLTWPQVLLAEGWGYSCLSIDKETVGIFYE | |||||||||||||
9 | 6lvbA | 0.11 | 0.06 | 0.58 | 0.90 | CNFpred | -----------------------------------------------------DIAIRGYCDRP-SVATGETIRFYVSANETRGTFDAELVRLIHGDS-------------------------------NPAGPGYKEEAI-KSDLEG------QYPARFQRTQFGSYVEVAD----------------PDAGLQPD--AFSVHLFLWSTTPS------RGRQGIASRWNDRQSGWNLAIEDGRVVFTIGDGS---GATSSVV-IWYSITGVYDPKQLRLYQK | |||||||||||||
10 | 4av3A | 0.07 | 0.05 | 0.75 | 0.67 | DEthreader | FEAIVAIALL------------FLGAVMSAGLVLVYL-VSYACIAMDRGLDLESGAVSISYMFPVNLVHQV--------------------PK---------------ETIQALISYPIFFAV--ALLTVV-LTAFLT----YFYLKLLD-LGFRFGAISPWFSAGVAIALGMLSFVATSVSVDYGPIADNAGG---GNTAGKGFAIGSAIFAAL-------FASYMFSQISDVLLLVGLGITYFYLAKAKMVDE-ITNAQMYPLLIKISVSVIAVSI----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |