Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | PQQGEIKLPNGVATLQVPENFYYLSPEDTETVLVKIWGNPPGGEKTLGMIFPTRVTPYDNTAWGVTVEYVEDGYVSDEDADKINYDELLSDMKESTANASQERIKQGYDAISLIGWAAKPYYDEKTHKLHWAKEIKFGSQEINTLNYNIRVLGRKGVLVLNFIAGMDQLDMINSKIDTVLKIADFNEGSRYADFNPDIDTVAAYGIGALVAGKVAAKVGILATILLFLKKLWIFLLIGA |
1 | 2xb3A | 0.09 | 0.06 | 0.62 | 1.07 | DisCoVER | | -GLQAYVDSYDGYEFLYPRGWVQV----Q---V---------EDPVDVVFHDI-----IETTENVSVVVNTVTKS-LEELGSP-EEVGDRLLRN-APSE---------SGRSSALIAATSQKADDKTYYILEYAVTLP--AQQRHNLSSIAVSRGKVYTLSVSAPEERWPKVEDQFKTIVSSFTV------------------------------------------------------ |
2 | 3jcuP | 0.07 | 0.05 | 0.68 | 1.08 | MAPalign | | TEFMPYNG--DGFKLLVPSKWNPS----K--EK--------EFPGQVLRYEDN-----FDATSNLSVLVQPTDKKSITDF--GSPEDFLSQVDYLLGQAYTDSEFDSGVVASAN-VLESSTPVDGKQYYSITVLTRTADGDGGKHQVIAATVKDGKLYICKAQAGDKRWKGAKKFVESATSSFSVA----------------------------------------------------- |
3 | 2xb3A | 0.09 | 0.06 | 0.65 | 1.15 | CEthreader | | SGLQAYVDSYDGYEFLYPRGWVQVQ----------------VEDPVDVVFHDIIET-----TENVSVVVNTVASTKSLEELGSPEEVGDRLLRNIIAPSE--------SGRSSALIAATSQKADDKTYYILEYAVTLPA--QQRHNLSSIAVSRGKVYTLSVSAPEERWPKVEDQFKTIVSSFTVY----------------------------------------------------- |
4 | 2lnjA | 0.11 | 0.07 | 0.65 | 0.83 | DEthreader | | ASLQRYSDTKDGYEFLY--PNGWIGVD--VK--------GASPGVDVVFRD-LI-ERD---E-NLSVIISEIPSTLT-DL-GTATDVGYRFMKTVN-DASQ-G------DRQA-ELI-NAEARDEQVYYTLEYRVLVGD-NVERHDLASVTTNRGKLITFDLSTAEDRWDTVKSLFDTVASSFHVY----------------------------------------------------- |
5 | 2lnjA | 0.09 | 0.06 | 0.64 | 0.83 | DEthreader | | ASLQRYSDTKDGYEFLY--PNGWIGVD--VK--------GASPGVDVVFRD-L-IERD----ENLSVIISEISTLT--DL-GTAT-DVGYRFMKTVNDASQ--G-----DRQA-ELI-NAEARDEQVYYTLEYRVLVGD-NVERHDLASVTTNRGKLITFDLSTAEDRWDTVKSLFDTVASSFHVY----------------------------------------------------- |
6 | 6e8aA | 0.10 | 0.06 | 0.62 | 0.43 | HHpred | | -SGQPISLMDGKLSFSLPADMTDQS-------G--KLGT--Q--ANNMHVYSDP-----TGQKAVIVIV--------GDNTDEALPVLANRLLEQQRSR--------DPQLQVVTNK--SIELKGHTLQQLDSIISAKG--QTAYSSIVLGKVDNQLLTIQVTLPADNQQKAQTTAENIINTLVIK----------------------------------------------------- |
7 | 2xb3A | 0.13 | 0.08 | 0.63 | 0.65 | MRFsearch | | ---QAYVDSYDGYEFLYPRGWVQVQVE-----------------DPVDVVFHDI----IETTENVSVVVNTVSTKSLEELG--SPEEVGDRLLRNIIAPSE-----SGRSSALIAAT----SQKADDKTYYILEYAVTLPAQQRHNLSSIAVSRGKVYTLSVSAPEERWPKVEDQFKTIVSSFTV------------------------------------------------------ |
8 | 2xb3A | 0.11 | 0.07 | 0.64 | 0.88 | SPARKS-K | | SGLQAYVDSYDGYEFLYPRGWVQVQ----------------VEDPVDVVFHDIIE---TTENVSVVVNTVA----STKSLEEGSPEEVGDRLLRNIIAP------SESGRSSALIAATSQKADD---KTYYILEYAVTLPAQQRHNLSSIAVSRGKVYTLSVSAPEERWPKVEDQFKTIVSSFTVY----------------------------------------------------- |
9 | 2xb3A | 0.09 | 0.06 | 0.64 | 1.03 | MAPalign | | SGLQAYVDSYDGYEFLYPRGWVQV-------QV---------EDPVDVVFHDIIE-----TTENVSVVVNTVASTKSLEEL-GSPEEVGDRLLRNIAP--------SESGRSSA-LIAATSQKDDKTYYILEYAVTLP--AQQRHNLSSIAVSRGKVYTLSVSAPEERWPKVEDQFKTIVSSFTVY----------------------------------------------------- |
10 | 2lnjA | 0.10 | 0.07 | 0.67 | 1.05 | CEthreader | | ASLQRYSDTKDGYEFLYPNGWIGVDVKGAS-------------PGVDVVFRDLIERDE-----NLSVIISEIPS-DKTLTDLGTATDVGYRFMKTVNDASQGD-------RQAELINAEARDEDGQVYYTLEYRVLVGD-NVERHDLASVTTNRGKLITFDLSTAEDRWDTVKSLFDTVASSFHVY----------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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