Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | RLSKVALVAAIAFFASLVSFGNITDYGTNYEFVQHVFDMDTIFPNSTIKYRAITSPALHTAGYILIIAAETLTAILCWIGTYAMLTKLGAPAAAFNNAKKWAIAGLTLGFLTWQVGFMSIGGEWFGMWMSHQWNGIDSAFRFFITIIAVLIYVSM |
1 | 4a01A | 0.08 | 0.07 | 0.86 | 1.00 | DEthreader | | DADEDDNVGDNVGDIAGMGSDLFGSY-AESSCAAL----------------AMYGAVAALGMLSTIATGLAIDAYGPISDN-AGGIAEGMSHRIRERTDALDAAGNTTAAIGKGFAI--AFG-LVM-TPVLGSGVQIAISASNTGGAWDNAKKYI |
2 | 4o5jA1 | 0.08 | 0.08 | 0.95 | 1.17 | DEthreader | | LNYLKSFTNNNYNSIFNVQ-VI-----TSVLGFWSLYWIVIGVSNTSGAITSTNYPTQVFNNIKAMIPILQQAVTLSQSNHTLSASLQAQFAKDIYTFAQNQKQVISYAQDIFNL-FNSI-PAEQYKYLEKVVNLNQEVQTIKNNVSYYGNRVDA |
3 | 3n8uA | 0.10 | 0.08 | 0.83 | 1.00 | DEthreader | | WNY-RNVAALLKTDATNLYNAWNSS-ESYASLFKAH-SGSP---------YASALNPVVTQYVDVVVPTYKSLKEKNDALYNAVIVLADNPSSAFETACDAWITAREPWEKSEAFLFGPVD--E----------G--LDPNDSWPGFHTLEFLYK |
4 | 4o5jA | 0.09 | 0.08 | 0.95 | 1.17 | DEthreader | | LNYLKSFTNNNYNFVLTVSNALNLAQQLMD------MWKIIGVSNTSGAITSTNYPTQYFNNIKAMIPILQQAVTLSQSNHTLSASLQAQFAKDIYTFAQNQKQVISYAQDI-FNLFNSIPAEQYKYLEKAYVVLNQEVQTIKNNVSYYGNRVAA |
5 | 6akfA | 0.09 | 0.08 | 0.91 | 0.83 | DisCoVER | | EITGTSLAVLGWLCTIVCC----------A--LPMWRVSAFIGSSIITAQITWEGLWMNCQDLQAARALIVVSILLAAFGLLVALVGATAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFPLVPAQK-REMGAGLYVGWAAAALQLLGGA- |
6 | 6ehqL | 0.05 | 0.05 | 0.85 | 1.00 | DEthreader | | IRNIILAAHTTHDHIVHFYQLSA-L--VDITSAL-------------YHPAMKLPPEVNLI-AVAHYLQALECQRDANRVVALLGGNANVLNERLMYIKSFIDKLSDFVEQVYKVDTA-I-----YPEWLTQLGRIIGTVHCCELQDILQNQYSA |
7 | 6akfA | 0.08 | 0.08 | 1.00 | 0.72 | CEthreader | | EITGTSLAVLGWLCTIVCCAFIGSSIITAQITWEGLWMNCVVQSTGQMQCKMYDSLLALPQDLQAARALIVVSILLAAFGLLVALVGAQQDETAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFYNPLVAGLYVGWAAAALQLLGGALLAA |
8 | 6vd7A | 0.05 | 0.05 | 0.91 | 0.82 | EigenThreader | | LAVDKLVSCIAVGLPLLLISLAFAQEITLGRQAAYVDSFCWAAV---PLWLHKF-----------FPYILLLVAVLLYLPNLFWRFTAKNNSIKYLICRVVTLIIVFTACIYLGYYISLFSPPLVQCKLIAVGVFRLLSYINLIIYVLIMPFIIY |
9 | 6ly9N | 0.14 | 0.12 | 0.83 | 0.27 | HHpred | | ------------------------AKPKVEEALARHYAEPVDADRIPPKYGTFDPTPVVPPFWFGMIVGDIGYALLFYLVGRWLSGYVKRNALKPQVIGKLVHILNWMVFWTVVWGV--IYGEFFGTFLIPILDTANLLILLSVAFGVVLVFFGL |
10 | 6s7tA | 0.17 | 0.17 | 0.98 | 0.23 | MRFsearch | | -LLSFTILFLAWLAGFSSRLFAVIDPWFNYRSTHHLASHRAWYPLGRIVGGTVYPGLMITAGLIVCVFLAPTFSGLTSISTFLLTRELWNQGAGLLAACGIAIFALQFTYYLWVKSWTMCCCLSYFYMVS-AWGGYVFIINLIPLHVFVLLLMQ- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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