Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LWRDEGIIQDSQYEQLSQRYQFDSLDNVAQDRFIFILIGVGCILVGLGAITFVAANWQAWSREVKLVLLLSLFFATNIIGFFLWREPVFDNAGKKRRQRKRVFGHGLLLLGALLLGANMAFMAQTFHISGSDYELYLFWGIGVLVMAYGLRLASLG |
1 | 7jm6A | 0.10 | 0.10 | 0.96 | 1.00 | DEthreader | | QLFLERRINHAAFRTVEIKRVIMIGILTGLVACFIDIVVENLAGLKYRVVKDNIDKFTEKGGSFSLLLWATLNASVVMVGSVIVAEVAPHVVRL-KTLVIKVCGVILSVVGGLAATAAVGFVMI----YCSRTL-MFLMYFFLAWTYGLVSAGFIP |
2 | 3jbrE | 0.12 | 0.10 | 0.82 | 0.67 | DisCoVER | | --------------------------MSPTEAPKVRVTLFCIGIVLAMTAVVSDHWAVLSEFTTQKEYSISAAAISVFSLGFLIMGTICALFRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRIYYYSWSFACACAAFVLLFLGGISL-LL- |
3 | 6z16D | 0.13 | 0.10 | 0.81 | 1.00 | DEthreader | | ------FFE--MLMSSYVLLVLGTQ-Y-PPTPVLALFGGLLTKVGVYSILRTFTLLFT-HDAAYTHTLLAWLALGTIIIGVIGAVAY------N--DMRYIVIYNIIAAVGVMIFGISI-M-T------P---ESVEGTFIGKLLLSSLVLYMKIF |
4 | 4gbyA1 | 0.08 | 0.08 | 1.00 | 0.49 | CEthreader | | LFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYYVPEFVIYRIIGGIGVGLASMLSPMYIARGKLVSFNQFAIIFGQLLVYCVNYFIARS |
5 | 5xjjA | 0.10 | 0.10 | 1.00 | 0.72 | EigenThreader | | VFVLVFSNGPAMATSVSFWFYAVILSCYVRFSTSVLSICLTTETLHYVISSGVAAAVSTRVSNNLGAGLCLWLVESAFFSILLFTFRNISNSKEVVDYVADLSPLLCLSFILDGFTAVLNGVARGSGWQHIGAWNNIFSYYPVGVYLAFRHDLNGK |
6 | 6iu3A | 0.13 | 0.10 | 0.77 | 0.32 | HHpred | | -LARYG-IEPHEYGPVVNALRKKPQEKPDPKRALQSAFTIAIAYVLGGLVPLIPYMFIPVAR-KAVVAVILTLMALLIFGYAKGYFT-----------DNKPFKSALQTALGAIASAAAFGMAKAVQSENLYFQ---------------------- |
7 | 6yofA1 | 0.12 | 0.11 | 0.93 | 0.32 | MRFsearch | | ---GTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAA------GYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMIS-- |
8 | 4o6yA | 0.12 | 0.12 | 1.00 | 0.66 | FFAS-3D | | TWTVGGLASSDNKDHIFNVHKSVQGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGSLHSWLGLACLFLFAFQWAAGFVTYWYPGGSRNSRASLMPWHVFLGISIYALALVTATTGILEKVITRYSTEAMLVNTMGVLILILGGFVILGVVT |
9 | 6v3fA | 0.11 | 0.11 | 0.99 | 0.83 | SPARKS-K | | DLPVFAVSYIIVFLYISLALGSYSRCSRVAVESKATLGLGGVIVVLGAVLAAMGFYSYLSSLVIIQVVPFLVLAVGADNIFIFVLEYQRLPRMPG-EQREAHIGRTLGSVAPSMLLCSLSEAICFFLTPMPAVRTFALTSGLAIILDFLLQMTAFV |
10 | 3rkoB | 0.09 | 0.07 | 0.75 | 0.95 | CNFpred | | -------------TWLADAMA-------GPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQ---------------TDIKRVLAYSTMSQIGYMFLALGVQ----AWDAAIFHLMTHAFFKALLFLASGSVI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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