>PF09913 (395 residues) LFFGVLFAVINAPFQDPDEPIHFYRAYQISTGQMFEQKNNSGIGGYLPQNLIKTSENLSE DIKAKSNKKQDINKIKYYLNLPLNKNKVAFNDFRSATIYSDIVYIPQSIGINLAKIFRAS ALYMMYFGRIANLICWTIIVFFSVKLIPFKKNLMAFLALTPMNLYQAASLSADAMTNSMA FLSIALVLRYAFGEEEAKLTKRQIVTMIIAFTLLAFSKRIYFVMCILFFIIPMKKFNSKK DYIGTFVIMLGACLMSLVTVSVISKILAIKVSAGSYTPGQMEFVLSHPITYIHILLRTFH FKMSFYAISFIGVFGWLDTRLPLNLYLFYGVALVLIALFEHTLIEKNKDRIIMFIVFIIN VGLIMSALYVSWTPKAANIIEGIQGRYFIPIIPLL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LFFGVLFAVINAPFQDPDEPIHFYRAYQISTGQMFEQKNNSGIGGYLPQNLIKTSENLSEDIKAKSNKKQDINKIKYYLNLPLNKNKVAFNDFRSATIYSDIVYIPQSIGINLAKIFRASALYMMYFGRIANLICWTIIVFFSVKLIPFKKNLMAFLALTPMNLYQAASLSADAMTNSMAFLSIALVLRYAFGEEEAKLTKRQIVTMIIAFTLLAFSKRIYFVMCILFFIIPMKKFNSKKDYIGTFVIMLGACLMSLVTVSVISKILAIKVSAGSYTPGQMEFVLSHPITYIHILLRTFHFKMSFYAISFIGVFGWLDTRLPLNLYLFYGVALVLIALFEHTLIEKNKDRIIMFIVFIINVGLIMSALYVSWTPKAANIIEGIQGRYFIPIIPLL | |||||||||||||||||||
1 | 5ezmA1 | 0.11 | 0.08 | 0.70 | 1.03 | DisCoVER | LVVWFVSLDMR-HLVGPDEGRYAEISREMFSGDWVT-------IR-Y-------------------------------------------N-ALKYFEKPPFHMWVTVVGYELF-----GL--GEWQARLAVALSGLLGIGVSMMAARWAAAFTGLALLAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPVAARRG---WMVACWAAMGVAILTKGVGILPGLVLVYTLWRRL--------HLALGVVVMLVITVPWFYLVSRNFPFFFIHEHWQRRS--G------S--VF--YF--------LPLVIGGFLPWAGIF---------PKLWTAMRARFPAL------MAGIWAIAIFVFFSIS-RS---------K---LPGYIVPVIPA- | |||||||||||||
2 | 5ezmA1 | 0.08 | 0.06 | 0.77 | 1.37 | SPARKS-K | ----------------------------------------SAATGWVVLFVAVALVVWFVSLDMRHLVGPDEGRYAEISREMFASGDTIRYNALKYFEKPPFHMWVTVVGYELFG----LGEWQARLAVALSGLLGIGVSMMAARRWFGAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKLVGIALPGLVLVVYTLVTRDWWRRLHLALGVVVMLVITVPWFYLVSVRFFFIHGSVFYFLPLVIGGFLPWAGIFPKLWTAMR-------------------ARFRPALMAGIWAIAIFVFFSISRSKLP-----GYIVPVIPALGILAGVALDRL---------------------- | |||||||||||||
3 | 6p25B2 | 0.08 | 0.07 | 0.83 | 1.16 | MAPalign | LFTRMYKIG-INNHVVWDEAHFGKFGSYYLRHEF-----------------------------------------------------------YHDV-HPPLGKMLVGLSGYLAYNGSWDFYLDYVKMRLFNASFSALCVPLAYFTAIPTVWLMTVLVLENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQPFSRKW-WKWLLITGISLGCTISVKMVGLFIITMVGIYTFLADKTYINHWLARIGLIIVPFCIFLLCFKIHFDLLSHSGTGDANMSLFQARIHLNLAMMATNNVPYLASSAQWPLNVGLRLCKYFLLGTPASTWASSVAVLAFMATDLRNPSNWNVFLMGGFYPLLAWGLHYMPFVI------MSRVTYVHYLPALYFALII | |||||||||||||
4 | 5ezmA | 0.11 | 0.09 | 0.84 | 1.87 | HHsearch | VAVALVVWFDMRHLVGPDEGRYAEISREMFASGDWV----------T------------------I----------------RYNA-L---K---YFEKPPFHMWVTVVGYELF---GLG----EWQARLAVALSGLLGIGVSMMAARRGAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVYTLVTRDWGLWRRLHLALG-VVVMLVITVPWFYLVSVRNEFHQRRSGSFLPLVIGGFLPWAGIFPLWTAMRAMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRL-SPRSWGKQLIGMAIVAACGLL---ASPVVALNANHNSFYYAVWVAVAFVML | |||||||||||||
5 | 5ezmA | 0.11 | 0.09 | 0.79 | 1.32 | FFAS-3D | VAVALVVWFVRHLVG-PDEGRYAEISREMFSGDWVTIR----------------------------------------------------YNALKYFEKPPFHMWVTVVGYEL---FGLGE----WQARLAVALSGLLGIGVSMMAARRAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVAT------------------------ | |||||||||||||
6 | 5ezmA | 0.08 | 0.07 | 0.86 | 1.33 | SPARKS-K | FVAVALVVWFVSHLVGPDEGRYAEISREMFASG---------DWVTI------------------------------------------RYNALKYFEKPPFHMWVTVVGYELFG----LGEWQARLAVALSGLLGIGVSMMAARRWFGAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKLVGIALPGLVLVVYTLVTRDWGRRLHLALGVVVMLVITVPWFYLVSVRNPEFPGSVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFSRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFV | |||||||||||||
7 | 6p25A2 | 0.08 | 0.07 | 0.83 | 1.11 | MAPalign | AVIRLHGLAWPDSV-VFDEVHFGGFASQYIRGTY------------------------------------------------------------FMDVHPPLAKMLYAGVASLGFQGDFDFTTPYVLMRFFSASLGALTVILMYMTYSGVMWVALMSAICNSYVTISRYILLDAPLMFFIAAAVYSFKKYEMYPANSLNAYKSLLATGIALGMASSSKWVGLFTVTWVGLLRLWFMSIFKVAFAKLAFLLGVPFALYLVFFYIHFQSLTLDRSTLKNNYKPASFISKFIESHKKMWHINKQPTSWPFLLRGISYWNVYLLGNAIVWWAVTAFIGIFGLIPILKDSKVVNFHVQVIHYLLGFAVHYAPSF---LMQRQMFLHHY--LPAYYFGILA | |||||||||||||
8 | 5ezmA1 | 0.11 | 0.08 | 0.74 | 1.85 | HHsearch | VAVALVVWFDMRHLVGPDEGRYAEISREMFASGDW-----------V-----------------TIR----------------YNA-L---K---YFEKPPFHMWVTVVGYELF---GLG----EWQARLAVALSGLLGIGVSMMAARRGAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNP------EFPNF--FFIHEHWQR-------RSGSVFYFLPLVGGF-------LPWA------GIFPKLWT-AMR-ARFRPALM-AGIWAIAI-FV----F-FSIS--R-----SKLPGYIVPVIPAL | |||||||||||||
9 | 5ezmA1 | 0.11 | 0.09 | 0.75 | 1.25 | FFAS-3D | VAVALVVWFVRHLVGP-DEGRYAEISREMFSGDWVTIRYNA----------------------------------------------------LKYFEKPPFHMWVTVVGYEL---FGLGE----WQARLAVALSGLLGIGVSMMAARRAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRN---------PEFPNFFFIHEHWQRRYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSKLPG------YIVPVIPALGILAGVALD------------------------ | |||||||||||||
10 | 3wajA1 | 0.11 | 0.10 | 0.88 | 1.27 | SPARKS-K | LVIAALISVKLRRLGGNDPWYYYRLIENTIHNF-------PHRIWFDP---------------------------------------FTYYPYGSYTHFGP---FLVYLGSIAGIIFSATGESLRAVLAFIPAIGGVLPVYLLTREVDKRAAVIAAFLIAPGQFLQLGFNDHHIWEAFWQVSALGTFLLAYNRHDLTARQMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLANADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERGMPLAVIVLTANAVLHFLFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMFIAAAVSAVYSALALSVVFDKLHFRVAFALLIALAA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |