>PF09911 (187 residues) NYWKWAFLILLGVVLGSSIFLGTRIFANREPDFAKVPAITQRQGDPVLTINTNKEKVNQM ISFFLTDYQKDQGIQYKFYLENEAMLNGTFEVLGFPINFYLYFDPYVMENGNVQLKAKSL SIGTLSLPIKDIMNMIKRNYKLPDWIEINTDDLTIMLRLDRFRMQNGMYIKADKIDLVND DIRFSLY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NYWKWAFLILLGVVLGSSIFLGTRIFANREPDFAKVPAITQRQGDPVLTINTNKEKVNQMISFFLTDYQKDQGIQYKFYLENEAMLNGTFEVLGFPINFYLYFDPYVMENGNVQLKAKSLSIGTLSLPIKDIMNMIKRNYKLPDWIEINTDDLTIMLRLDRFRMQNGMYIKADKIDLVNDDIRFSLY | |||||||||||||||||||
1 | 3l6iB | 0.12 | 0.09 | 0.68 | 1.04 | DisCoVER | ----------------------------------------HHSHNQLTQYTITEQEINQSLANNFSKDAHIVLTNLTSQIGNKVTLTGDANLDQKATKLKLKALPVFDKKGAIFLKEEVVDATVQLLLNQALRNY----------------FNQQPAYVLREDG--EAAKLAKGIEVKPGEIVIPF- | |||||||||||||
2 | 4qdfB | 0.07 | 0.05 | 0.77 | 0.83 | DEthreader | ITLDQDLLTIPRIAG------------EWTDWVWYTTINIMFFPVYF--NVFEGHVA--SQ--FM-RGQ--SRSDASYFG--PSFMIDDLVYEYVESVLINCHYPVSQ-----DKFVLMYGMIVGNIA-KGFEQ-DIE-------IWRN------KTRIDNPLLCEEDGVYRRYEQFDVVMTDFEFM | |||||||||||||
3 | 3l6iB | 0.11 | 0.09 | 0.77 | 0.93 | CEthreader | ---------------------------------------HHHSHNQLTQYTITEQEINQSLAKHNNFSKDIVLTNLTSQIGNKVTLTGDANLDNSATKLKLKALPVFDEKGAIFLKEEVVDATVQPEKQTVQTLLPYLNQALRNYF----NQQPAYVLREDGSQGEAAKKLAKGIEVKPGEIVIPFT | |||||||||||||
4 | 6ekvA | 0.08 | 0.08 | 0.96 | 0.73 | EigenThreader | EDKDFLSLAFRNWFNDNIQQFEYQWLKPTQISYHAVDNRLQLTKTQAAFGISFPLFIEHFLKQALLSSSLKPGKLKLSLQNNLIVLELFDLTWGVTGHFDFRQEYELT----LESKSEKKIYINSTGQRIAIGVKKITGTAVFGAVGLNNDYSAIPGINSFQQCIPDLKVTFGKLQ---GIYLLGGT | |||||||||||||
5 | 4trtA | 0.15 | 0.09 | 0.58 | 0.26 | HHpred | ----------------------------------------------VMKANVTKKTLNEGLGLLERVIPSRSSNALKVETSGGLTLSGT----NLEIDLSCFVPAEVQQP------------ENFVVPAHLFAQIVRNLG--GELVELELSGQELSVRSG------GSDFKLQTGDIEA-------- | |||||||||||||
6 | 3l6iB | 0.11 | 0.08 | 0.70 | 0.52 | MRFsearch | ----------------------------------------------LTQYTITEQEINQSLAKHNNFSKDIGVADAHIVLTNKVTLTGDANLDNKATKLKLKALPVFDKKGAIFLKEEVVDATVQQTLLPYLNQALRNYFNQQPAYVLREDGSQGEAA----------KKLAKGIEVKPGEIVIPFT | |||||||||||||
7 | 3l6iB | 0.14 | 0.10 | 0.67 | 0.64 | FFAS-3D | ------------------------------------------------QYTITEQEINQSLAKHNKDIGLPGVADAHIVLPNKVTLTGDANLDNLKLKALPVFD---KEKGAIFLKEEVVDAQTVQTLLPYLNQALRNYFNQQPAYVLREDGSQ----------GEAAKKLAKGIEVKPGEIVIPF- | |||||||||||||
8 | 3l6iB | 0.13 | 0.10 | 0.72 | 0.74 | SPARKS-K | ---------------------------------HHHSHNQLT------QYTITEQEINQSLAKFSKDIGLPGVADAHIVLTNKVTLTGDANLDSQKATLKLKALPVFDKEKGAIFLKEEVVDATVTL-LPYLNQALRNYFN----------QQPAY-VLRE-DGSQGEAAKAKGIEVKPGEIVIPFT | |||||||||||||
9 | 1vh4A | 0.12 | 0.10 | 0.82 | 0.65 | CNFpred | ----EVFLHLTESLAQSVTHIAVKRGQRPAKPL-------------LLMHITQGVAGEEVNTAHY---------RHHLDLAAEATVIEHFVSLDARHFTGARFTINVAANAHLQHIKLSHHFAHNDL-------LLAEDATA-FSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPNEVCDTRTW | |||||||||||||
10 | 3jb9K | 0.06 | 0.04 | 0.75 | 0.83 | DEthreader | -------G-GGGGGGGGGGGGGGGGGGGGG-W-HAPWTLM-R--VISGHWVAGATVRG-LA-VSPRHLH-PTLDVLVTAGRTVASLAV-QEFD---PQVVTGSM-----------DSTIRLWDKTLTTLTH----LHEFTFA----IKHWGNFVTLSFGMFSFDT-LRLITCEA-------DKSVKI | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |