Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MSLIITYVGSKGCVMAGDKRSIGFLGDKEQREVLEEEMYSGKIKTTEELLQRAEQLDINLKITDDVEKVRKIGDVLVGEVKLRTTTETKRKRIYGTSGGYHEVELSGSQIKNAKSGQSSIVVFGNKFTKEIANKHLQKYWKSQTSIKEIAKIFQRIMEDVAQSTPSVSPQFDIYTVHPQLNHKQAMEILRTTIVKDVK |
1 | 5loyA | 0.14 | 0.10 | 0.69 | 1.00 | DEthreader | | -TYCVGIRLDEGLVFASDSRTNAG------V--DN--I-----------------------STF-R-KMHVFEVIVLLTAGNL---DFNASFILGGQPRLFLIYPA---GNFIEATPTPFFQIGE---TKYGKPILDRVITPDTSLEDAAKCALVSFDSTMRSNLSVGLPLDLLVYERDS-LR--------------- |
2 | 5iauA | 0.08 | 0.07 | 0.80 | 0.83 | DEthreader | | -CTSILVGKKGSTLISRNDDGH--------------------EALD----------------NGIWPAAGINSNVAMSATETITSQFEPNGISFADNEEVWWLETIGHHWAAVRIPDDAYVVAPNNPRTWYGQKFFSPDDTHANRK--ISEDVKFVLSSHFEDPGINNHNVHILQIRN-NVPTEIAGIHWPFYATPYK |
3 | 1j2qH | 0.17 | 0.15 | 0.86 | 0.54 | HHpred | | -TTTVGLVCKDGVVMATEKRAMTTAGSVGDAQFLARIIRRERKPTVRAIATLTSNLL-----NSYR--YFPYVQLLIGGIDSE------GKSIYSIDP-------IGGAIEE-----KDIVATGSG--SLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDEFYQYSPEEVEQILAKFRK |
4 | 3h4pc | 0.12 | 0.08 | 0.69 | 0.64 | DisCoVER | | -TTTVGLICDDAVILATDKRAS-------------------------------------LVADKEAKKLYKDYIAMTIAGSASRMFPFLTQIIIGGYAKLFSLDPLG----GMNEEKTFTATGSG--SP-IAYGVLEAGYDRDMSVEEGIKLALNALKSAM-ERDFSGNGISLAVITK--------------DGVKI- |
5 | 5nywA | 0.10 | 0.09 | 0.88 | 0.35 | MRFsearch | | --YCVAMRLSSGLAFASDSLVVQSAGNLATTQSIVSLLQRRCVASMYEAATLLGETVREVINRD-----DFNCNLLLGGQIKG--------------EGLRLFHIYPQGNFIEATQDTPYFQIGES---KYGKPIIDRVLSYDTPLDQAMQCALISMDSTLRSNLSVGLPLDVMIYPLHPYFMMIRKGWGEGLVSIFA |
6 | 3jtlN | 0.12 | 0.10 | 0.82 | 0.85 | SPARKS-K | | -TTTVGITLKDAVIMATERRGMTIAGLVGDAQVLVRYMKAVNMPIATLLSNMLNQV--------------------------KYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDI----YASTGS--GSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKLPTDQIESRIRKLGLIL-- |
7 | 1q5rN | 0.15 | 0.12 | 0.79 | 0.84 | MAPalign | | GTTIVALTYKGGVLLAGDRRAT----------------------------------QGNLIASRDVEAVYTDEYSAAGIAGTAAMQGLAVVPLLVGYGRIVSYDV----VGGRYEERAGYHAVGS--GSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGYPTAVTITQAGAVHVSEETTSELARRIV- |
8 | 1iruL | 0.10 | 0.09 | 0.95 | 0.61 | CEthreader | | -TTTLAFKFRHGVIVAADSRAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRINKERISVAAASKLLANMVYQYKGMGLSMGTMICGWPGLYYVDSEG------NRISGATFSVGS--GSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSG |
9 | 3akcA | 0.13 | 0.12 | 0.94 | 0.61 | MUSTER | | MRGIVTIDGPSAS-VAAAALGVPYLSGLLYRAAAFLALRAGDPGDEEGLLALLEGLGVRLLAQAEGNRVLADGEDLTSFLHTARLPGVRANRRLKEVPPPFVAEGRDMGTAVFPEAAHKFYLTAS---PEVRAWRRAR---RPQAYEEVLRDLLRRDERDKAQSAP--APDALVLDTGGMTLDEVVAWVLAHIRR--- |
10 | 3gpwJ | 0.13 | 0.11 | 0.82 | 0.79 | HHsearch | | MDIILGIRVQDSVILASSKAVTSFAGEAGDTVQFLYSIREDYELSPQAVSSFVRQE---L--AKSIRSRRPYVNVLIGGYDKKK----NKPELYQID-------YLGTKVE------LPYGAHGY--SGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDVDDFQAQ------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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