>PF09894 (198 residues) MSLIITYVGSKGCVMAGDKRSIGFLGDKEQREVLEEEMYSGKIKTTEELLQRAEQLDINL KITDDVEKVRKIGDVLVGEVKLRTTTETKRKRIYGTSGGYHEVELSGSQIKNAKSGQSSI VVFGNKFTKEIANKHLQKYWKSQTSIKEIAKIFQRIMEDVAQSTPSVSPQFDIYTVHPQL NHKQAMEILRTTIVKDVK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MSLIITYVGSKGCVMAGDKRSIGFLGDKEQREVLEEEMYSGKIKTTEELLQRAEQLDINLKITDDVEKVRKIGDVLVGEVKLRTTTETKRKRIYGTSGGYHEVELSGSQIKNAKSGQSSIVVFGNKFTKEIANKHLQKYWKSQTSIKEIAKIFQRIMEDVAQSTPSVSPQFDIYTVHPQLNHKQAMEILRTTIVKDVK | |||||||||||||||||||
1 | 5loyA | 0.14 | 0.10 | 0.69 | 1.00 | DEthreader | -TYCVGIRLDEGLVFASDSRTNAG------V--DN--I-----------------------STF-R-KMHVFEVIVLLTAGNL---DFNASFILGGQPRLFLIYPA---GNFIEATPTPFFQIGE---TKYGKPILDRVITPDTSLEDAAKCALVSFDSTMRSNLSVGLPLDLLVYERDS-LR--------------- | |||||||||||||
2 | 5iauA | 0.08 | 0.07 | 0.80 | 0.83 | DEthreader | -CTSILVGKKGSTLISRNDDGH--------------------EALD----------------NGIWPAAGINSNVAMSATETITSQFEPNGISFADNEEVWWLETIGHHWAAVRIPDDAYVVAPNNPRTWYGQKFFSPDDTHANRK--ISEDVKFVLSSHFEDPGINNHNVHILQIRN-NVPTEIAGIHWPFYATPYK | |||||||||||||
3 | 1j2qH | 0.17 | 0.15 | 0.86 | 0.54 | HHpred | -TTTVGLVCKDGVVMATEKRAMTTAGSVGDAQFLARIIRRERKPTVRAIATLTSNLL-----NSYR--YFPYVQLLIGGIDSE------GKSIYSIDP-------IGGAIEE-----KDIVATGSG--SLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDEFYQYSPEEVEQILAKFRK | |||||||||||||
4 | 3h4pc | 0.12 | 0.08 | 0.69 | 0.64 | DisCoVER | -TTTVGLICDDAVILATDKRAS-------------------------------------LVADKEAKKLYKDYIAMTIAGSASRMFPFLTQIIIGGYAKLFSLDPLG----GMNEEKTFTATGSG--SP-IAYGVLEAGYDRDMSVEEGIKLALNALKSAM-ERDFSGNGISLAVITK--------------DGVKI- | |||||||||||||
5 | 5nywA | 0.10 | 0.09 | 0.88 | 0.35 | MRFsearch | --YCVAMRLSSGLAFASDSLVVQSAGNLATTQSIVSLLQRRCVASMYEAATLLGETVREVINRD-----DFNCNLLLGGQIKG--------------EGLRLFHIYPQGNFIEATQDTPYFQIGES---KYGKPIIDRVLSYDTPLDQAMQCALISMDSTLRSNLSVGLPLDVMIYPLHPYFMMIRKGWGEGLVSIFA | |||||||||||||
6 | 3jtlN | 0.12 | 0.10 | 0.82 | 0.85 | SPARKS-K | -TTTVGITLKDAVIMATERRGMTIAGLVGDAQVLVRYMKAVNMPIATLLSNMLNQV--------------------------KYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDI----YASTGS--GSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKLPTDQIESRIRKLGLIL-- | |||||||||||||
7 | 1q5rN | 0.15 | 0.12 | 0.79 | 0.84 | MAPalign | GTTIVALTYKGGVLLAGDRRAT----------------------------------QGNLIASRDVEAVYTDEYSAAGIAGTAAMQGLAVVPLLVGYGRIVSYDV----VGGRYEERAGYHAVGS--GSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDSATGGYPTAVTITQAGAVHVSEETTSELARRIV- | |||||||||||||
8 | 1iruL | 0.10 | 0.09 | 0.95 | 0.61 | CEthreader | -TTTLAFKFRHGVIVAADSRAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRINKERISVAAASKLLANMVYQYKGMGLSMGTMICGWPGLYYVDSEG------NRISGATFSVGS--GSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSG | |||||||||||||
9 | 3akcA | 0.13 | 0.12 | 0.94 | 0.61 | MUSTER | MRGIVTIDGPSAS-VAAAALGVPYLSGLLYRAAAFLALRAGDPGDEEGLLALLEGLGVRLLAQAEGNRVLADGEDLTSFLHTARLPGVRANRRLKEVPPPFVAEGRDMGTAVFPEAAHKFYLTAS---PEVRAWRRAR---RPQAYEEVLRDLLRRDERDKAQSAP--APDALVLDTGGMTLDEVVAWVLAHIRR--- | |||||||||||||
10 | 3gpwJ | 0.13 | 0.11 | 0.82 | 0.79 | HHsearch | MDIILGIRVQDSVILASSKAVTSFAGEAGDTVQFLYSIREDYELSPQAVSSFVRQE---L--AKSIRSRRPYVNVLIGGYDKKK----NKPELYQID-------YLGTKVE------LPYGAHGY--SGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDVDDFQAQ------------ | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |