>PF09887 (453 residues) PYFIVASVEVGNTTTKCILTATNLEDGKTRLVSKIVSMTRDVRPPKEGEEVFGRTLNGVE LTRQSVAEMVRDTLLRAVKQSNLDIKEDIHFVVRSTGVVAGFDTPDEVGEFIKALADGCL MAGVPPNRMTPPMGMSNVPERFRKHTKLEQVVFDGAVASVTPPTGATGVEIVANEMEGEL ATAGIKEGAKWVDIDFRNPCISIDFGTTLDGRVISPDLPYAKTIGNFCGYAGAIPDAIIK GTGLVDSKKGTALDVADKTSLDMFTLKMKGKAIKEYAERIHEHIQIERVPKDRKRYGSVP VNSEAADSIGVVLIGCDVGNNGTDMDKLSEIGAEIYQKHNLKTLFAVIDEVMAKVVQRLV KVAQEEGLVFEDTVIGITGRAGITGAKPRLILQYLHELGINNKIEENVVFVDDGLARGAA VMARCMNSMGTSFNPLGGHRGGKCILGQRIKLQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PYFIVASVEVGNTTTKCILTATNLEDGKTRLVSKIVSMTRDVRPPKEGEEVFGRTLNGVELTRQSVAEMVRDTLLRAVKQSNLDIKEDIHFVVRSTGVVAGFDTPDEVGEFIKALADGCLMAGVPPNRMTPPMGMSNVPERFRKHTKLEQVVFDGAVASVTPPTGATGVEIVANEMEGELATAGIKEGAKWVDIDFRNPCISIDFGTTLDGRVISPDLPYAKTIGNFCGYAGAIPDAIIKGTGLVDSKKGTALDVADKTSLDMFTLKMKGKAIKEYAERIHEHIQIERVPKDRKRYGSVPVNSEAADSIGVVLIGCDVGNNGTDMDKLSEIGAEIYQKHNLKTLFAVIDEVMAKVVQRLVKVAQEEGLVFEDTVIGITGRAGITGAKPRLILQYLHELGINNKIEENVVFVDDGLARGAAVMARCMNSMGTSFNPLGGHRGGKCILGQRIKLQ | |||||||||||||||||||
1 | 4ehtA | 0.13 | 0.07 | 0.55 | 0.72 | DisCoVER | MYTMGLDIGS---TASKGVILKNG--EDIVASETIS-S-------------GT-GTTGPSR-----------VLEKLYGKTGLAREIKKVVVTGYGRMNY-----------------------------DADK---------------------QISELS-------------------CHARGVNFI------IPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDAAGTGRFLDVMAKII-------VDVSELG---SI--SMN--SQ-NE--VS--I--SS-------------------------------T-C------TVFAESEVISHLSEAKIEDIVAGIHTSVAKRVSSLVKR----IGVQ--RNVVMVGGVARNSGIVRAM---A-REINT--E--IIVPPQLTGALGAA--LY--A-------FDEA--------------- | |||||||||||||
2 | 1t3tA2 | 0.07 | 0.04 | 0.60 | 0.67 | DEthreader | -----------------------------------------------HCRHKIFLFKMINTFVSAAAVM-------------------------------------------MKVETHN-----WPGAATGS-------------------E------------AKPKAGLVGFSVADIMTEGPLGGA--NNEFGRPALTGYFRTYYIMLAGGIGTTASGEAMSIGERAPVLAGEALTNIKRIKLCPLGLTISAFARVE-D-VRHTLTPQL--DNALLLIDLGKGHNAL-----G---ATALA-QVYR-QLG----PAD--VRDVAQLKGFYDAMQ-ALVAARKLLAWHDRSGGLLVTLADILGDDHLA---L-F-E------------QALAGDRFVIFSESRTTLRVWWAE----TTWQMQRLRDNPQCADQEH-EAKAN----------- | |||||||||||||
3 | 6gwjK | 0.12 | 0.09 | 0.74 | 0.72 | CEthreader | --PAVLGFEGSANKIGVGVVRDG-------KVLANPRRTYVTPPGTGFLP---------GDTARHHRAVILDLLQEALTESGLT-SQDIDCIAYTKG-------PGMGAPLVSVAVVARTVAQLWNKPLVGV-----------------------------------------NHCIGHIEMGRLITGA--------TSPTVLYVSGGNTQVIAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNIEQMAKRGKKLV------------------------ELPYTVKGMDVSFSGILSFI-------------EDVAHRMLATGECTPEDLCFSLQETVFAMLVEITERAMAHCGSQ-------EALIVGGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIAQAGWEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD | |||||||||||||
4 | 2nlxA | 0.08 | 0.06 | 0.79 | 0.88 | EigenThreader | MYIGIDLG-----TSGVKVILL-NEQGEVVAAQTEKL-----TVSRPHPLWSEQD-------PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGALMMPGFTAPKLLWVQRHEYLRLRMTGEFAAGTMWKRDWSDVMLQACDLSRDQMLYEGSETGALLWGMATVPVVAGGGDNAAGAVGVG---------MVDANQAMLSLSGVYFAVSEGFLSKRWH-LMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPV-----------------------------WFLPYLSPQ---------AKGVFFGLTHQH----------------GPNELARAVLEGVGYALADGMDVVHA--CGIKPQSVTLIGGGA---RSEYWRQMLADISGQ------QLDYRTGGGPALGAARLAQIAANPEKSLIELLPQLPLEQSHL---PD | |||||||||||||
5 | 1huxA | 0.15 | 0.09 | 0.56 | 0.40 | HHpred | -SIYTLGIDVGSTASKCIILKDG---KEI--VAKSLV-------AVGTG------------TSGPARS-----ISEVLENAHMKKE-DMAFTLATG-----Y--------------------G---R--------NSLE-------------G--------I------ADKQMSELSCHAMGASFIW---------PNVHTVIDIGGQDKVIHVENGTMTNFQMNDKCAGTGRFLDVMANILEV-KV-----------------------SDLAELGAKST-------KRVA--------I-----------------SSTCTVFA-ESEVISQLSKGTD---KIDIIAGIHRSVASRVIGLANRVG---IVKDVVMTGGVAQ---NY-GVRGALEEGLGV-----EIKTSQYNGALGAALYAYKKA-------------------------- | |||||||||||||
6 | 2ivoA | 0.12 | 0.08 | 0.62 | 0.45 | MRFsearch | ----ALGIEGTAHTLGIGIVSE-----DKVLANVFDTLTTE-----------------PKEAAEHHARLMKPLLRKALSEAGVS-LDDIDVIAFSQ--GPGLGPALRVVATAARALAVKYRK----------------------------------------------PIVGVNHCIAHVEITKMFGV-------KDPVGLYVSGGNTQVLALEG---GRYRVFGETLIGIGNAIDVFARELGLG---------------------FPGGPKVEKLAEKGEKYIELPY-----------------------AVKGMD-----LSFSGLLTEAIRKYRSGRVEDLAYSFQETAFAALVEVTERAVAHTE---KDEVVLVGGVAANNRLREMLRIMTEDR-------GIKFFVPNGAMIAYTGLRMYKA-------------------------- | |||||||||||||
7 | 2ch5A | 0.13 | 0.09 | 0.68 | 0.75 | FFAS-3D | PQIYGG-VEGGGTRSEVLLVSEDGK-----ILAEADGLSTN----------------HWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLS---LSGGDQEDAGRILIEELRDR--------------------------------------------FPYLSESYLITTDAAGSIATA------------TPDGGVVLISGTGSNCRLINPDGSESGCGGSAYWIAHQAVKIVFDSIDNLEAAPHDI------------------GYVKQAMFHYFQV-----------------PDRLGILTH---------LYRDFDKCRFAGFCRKIAEQQGDPLSRYIFRKALGRHIVAVLPEIDPVLFQGKIGLILCVG--SVWKSWKEGFLLALTQGRAQNFFSSTLMKLRHSSALGGASLG--ARHIGHLLPM------------------ | |||||||||||||
8 | 6gwjK | 0.13 | 0.09 | 0.72 | 0.69 | SPARKS-K | --PAVLGFEGSANKIGVGVVRD----------GKVLANPRRTYVTPPGTG------FLPGDTARHHRAVILDLLQEALTESGLT-SQDIDCIAYTKGP----GMGAPLVSVAVVARTVAQLWNKP--------------------------------------------LVGVNHCIGHIEMGRLITG-------ATSPTVLYVSGGNTQVIAYSEHR--YRIFGETIDIAGNCLDRFARVLKISNDPS-------------------PGYNIEQMAK-------------RGKKLVELPYTV---KGMDVSF--------SGILSFIEDVAHRMLATCTPEDLCFSLQETVFAMLVEITERAMAHCGSQ---EALIVGGVGCN----VRLQEMMATMCQERGAR---LFADNGAMIAQAGWEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD | |||||||||||||
9 | 3en9A | 0.12 | 0.08 | 0.65 | 1.00 | CNFpred | DPMICLGLEGTAEKTGVGIVTSD----GEVLFNKTIMYKPPKQGI------------NPREAADHHAETFPKLIKEAFEVVDK---NEIDLIAFSQGPG----LGPSLRVTATVARTLSLTL---------------------------------------------KPIIGVNHCIAHIEIGKLTT-------EAEDPLTLYVSGGNTQVIAYVS--KKYRVFGETLIAVGNCLDQFAR-----------YVNLPH----------PGGPYIEELARKGKKLVDLP-----------------------YTVKGMDIA-----FSGLLTAAMRAYDAERLEDICYSLQEYAFSMLTEITERALAHT---NKGEVMLVGGVA----ANNRLREMLKAMCE---GQNVDFYVPPFCGDNGAMIAWLGLLMH----------------------- | |||||||||||||
10 | 3h3nX | 0.11 | 0.08 | 0.72 | 1.00 | DEthreader | AKYVMAIDQG--TTSSRAIIFD----RNGKKIGSSQKEFPQYFPK--------S--GWVEHNANEIWNSVQSVIAGAFIESGIR-PEAIAGIGITNQRETWYFSATKVLLFGTIDSWLVWKL-TDGQVHVTD--------------------YS--S---YNIHKLEWDEVKSNAGDQQAALFGQM-A-------FEKGMIKNTYGAFIVMNTGEEPQGYVYYALEG-SI--FVAGSAIQWLRDGLR-IETSPQSE-----ELAAKAK-GD-NEVYV-VPAFTGLG---------------------------APYWD-SEA-R--GA--VF-LT--TTK-EDFVRATLQAVAYQSKDVIDTMK-KDSGIDIPLLKVDGGAAKNDLLMQFQADILD-------ID--VQRALETTALGAAYLAGLAVG--------FWK--DLDELKS----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |