Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MKVAIFPPNSLILADLVERKGHEPLILQKEIRKKVTDPEIDSPPFNITQEDPIKGLKYAAIEVPSGVRGRMSIFGPLIEEADAAIIMEDAPFGFGCMGCSRTNELCVYYLRQKNIPILELKYPTSREETIELVNKINTFLDEL |
1 | 1ukzA | 0.09 | 0.08 | 0.85 | 1.00 | DEthreader | | SVIFVLGPGKGTQCEKLVKYSFVHLSAGDLLRAEQGRSQGELIK--C----------------KEGQIV-PQTFPQAFEVSKFILFFDCPEIMLIKNTFKETSMPVIEYFET-KSKVVRVRCDRSVEDVYKDVQDAIRDSL-- |
2 | 1p60A | 0.15 | 0.13 | 0.90 | 1.00 | DEthreader | | KKISIEGIGKTFVNILKQLCDWEVVPE--PVARWCNVNGGNVLFYACL--VDRYFASNLYESECM------Q--DNG-LELDGIIYLQ-ATPETCLEKLHYKHESWLRTDYLQEVPILTLDVNEDKDKYESLVEKVKEFLSTL |
3 | 1qf9A | 0.11 | 0.09 | 0.85 | 1.00 | DEthreader | | NVVFVLGPGGGTQCANIVRFGWVHLSAGDLLRQEQQGSKGEMIA--M----------------KNGEIV-PSTFNNSWEMTKFVLFFDCPEVMTIKFNTFNQTKLVIDHYNK-FDKVKIIPANRDVNEVYNDVENLFKSMGF- |
4 | 2ocpA | 0.12 | 0.11 | 0.90 | 1.00 | DEthreader | | RRLSIEGIGKSTFVKLLTTYEWHVATE--PVATWQNIQLGNLLMFSFL--VDR-FAKNLFENGSL------Q--SL--ITLHGFIYLQASVCLKLLEQLHGQHEAWLKLFALMNIPVLVLDVDDFETKQEDLMREVNTFVKNL |
5 | 6enoA | 0.19 | 0.18 | 0.95 | 0.72 | HHpred | | PRILITPQPHWKIHALIEGAGGVVVGEETCIGERYFKDLVEPA--A-DVEGMLKNIASLKVNCACPNTGRLEDILSMVQQVDGVIHYS----LQFCQPYGVESYLVGRELERRNIPFLKLESDFSEEDQGQLKTRIEAFLEMI |
6 | 6gaqA | 0.11 | 0.09 | 0.81 | 0.58 | DisCoVER | | AKILIAYASTEIADLIKVSLHEVVLQEM--E-------------------GMDAELIILGSYTWGELPEADFHLEIDLAGKKVAVFGSGDTLFCEAVTI--FEERLVERG--AELVQEGLKIEL-EEDVEKCSNFAIAFAEK- |
7 | 6enoA | 0.21 | 0.17 | 0.82 | 0.57 | MRFsearch | | -RILITGTPHWKIHALIEGAGGVVVGMLKNIAARSLKVNCACFTP---------------------NTGRLEDILSMVQKLDGVIHYS----LQFCQPYGVESYLVGRELERRNIPFLKLESDFSEEDQGQLKTRIEAFLEMI |
8 | 3g0oA1 | 0.12 | 0.10 | 0.90 | 0.60 | SPARKS-K | | FHVGIVGLGSGGAARSCLRAGLSTWDLNPQACANLLAEG-----ACGAAASAREFAGALVILVVN--------AAQVRQVLFDGVAHLKPGSAVVSSTISADAQEIAAALTALNLN-LDAPVSGGAVKAAAAFTRLKPVLDAV |
9 | 3cdxF | 0.10 | 0.10 | 0.95 | 0.58 | MAPalign | | PTVLLTGGVEYEGQIAISDLRVIMLPAVNMPAIQSDTRLSPVDGRDINRCFP--GD--P---RGTFSQMLAHFLDSILPMADISVDMHNMHYLALRARTLAAAEAFTSCVERRGIVSLGTELGVNIEGVRIGKRGILNVLKHM |
10 | 4xylA2 | 0.06 | 0.06 | 0.92 | 0.62 | CEthreader | | ERLIVLTNAGVQSTDTFADNGIYLSKPPESLIQEIKKFVPPFASFANPID----------ITGMAPDDWYYMGTLAALKDVDALTVLYCQTAVTTPIGVAKGIVDAIKEA-GNSKPVTVGMVGGPYPTPERASSAMSALYAYA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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