Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VEQTWFVLVELLTDLRKRDVDVPTSITEDVRLVRTSINFYKSDPENPEMMKELKRINDMLNSIQEELLELAETVSSDYPAQWIEKLKRAARGEEVHRPPQTKSKFIVGAPPGFAAARVHLREPLAEDRVQDIAETHSLIIEFEEDDLIAIYGDSEDIKKGLREIGSFFR |
1 | 3bwnB | 0.07 | 0.07 | 0.93 | 0.67 | DisCoVER | | GTGSTQLCQAAVHALSSLARSQPVSV--VA-AAPFYSTYVEETTYVRSGMYKWEGD--AWGFDGPYIELVTSDEAKVIHDFAHDIMLFTFSRIGWAGVSREMKWLPKSLESYPAFAWLGTKEET--DLVSELRRHKVMSRAGSDKKHVRVSMLSDVFNVFLERL----- |
2 | 1oa0A | 0.13 | 0.11 | 0.80 | 0.83 | DEthreader | | LIYVTKGLGQIATRLRAEGKAV-D--HRIDRLVTGNLFATIANF-D--DD-ILAERVRMTCAAKKELAASL--TD-KS--GLSDAAWEAMKAVATTVRRWLFGLMAAYAKHA--L-FMAADLVA-------L----------E--TGKFVSMNSLAVLALLSVKLEQFN |
3 | 3n89A | 0.09 | 0.09 | 1.00 | 0.61 | CEthreader | | VTLNMEFESQYYSLMTSDNHENVASIMAETNTLIQLPDRSVGGTTPDPFAQQVTITFGDVDRARMLMRRNCHFTVFMALSKMKMPLHELQAHVRQNPIQNVEMSFVDAAPENNFTLHFTLSTYYTAQLMPVIERETTTIISYPGNYEIKVVGNIDNVLKARRYIMDLLP |
4 | 3i87A | 0.06 | 0.05 | 0.85 | 0.65 | EigenThreader | | PALDLIRP--SADFARELKLPPHIRSDDVTYIAADEATKQAMVNPAEVRAGLDAMIAHIENGAA-----------------------FQWANDAQDTRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVNYSAFLTGSQAACKAACNAFTDAVL |
5 | 2d6fD | 0.16 | 0.13 | 0.82 | 0.34 | HHpred | | ------------FRLDRLGMSDPQQLREVAYQIGQILRSTRVKRGLGTILDLIPEIVEREVKRQLSLVEIRDTL------------Q--ERGAVVSVFADTESRIISGVSGIFHTDE-LPAYGITEEEVRGLRDAVGAS---QGDAVVMVAHERVTAENALREVIRRA- |
6 | 6xeoA | 0.11 | 0.09 | 0.81 | 0.55 | MRFsearch | | --LYMELLENAVDALKAGRSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLIARLRQQAQKLGIRKLEGN------------------------------EKGGVIEFAEKVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMR |
7 | 4fl0A1 | 0.13 | 0.12 | 0.91 | 0.76 | FFAS-3D | | INRRELEHIEKLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRASNIAQAGGLACLSSGGLKEIRSVNN-----YYKENRKILMDTLV----------SLGLKVYGGVNAPYLWVHFKGSKSWDVFNEILENTHIITVPGGEEYLRISGRRDHIVEASKRLQNFFN |
8 | 5t5sA | 0.08 | 0.07 | 0.86 | 0.67 | SPARKS-K | | AESLKKCLSVMEAKVKAQTAP-NKDVQREIADLGEALATA----VIPQ--WQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDSNPNQP-----------------LVILEMESGATAKALNEALKLFKLFTVDNEAGTCLCQVPQNAANEWVQQVSGLMD |
9 | 3aovA | 0.13 | 0.09 | 0.75 | 0.56 | CNFpred | | ------IIRKMEIAKQSTDL------CTNVFGQVVAWRYVDG----GYLEKHIPEIRKFYKPRRDAMLEALEEFMPEG------------------------VKWTKPE--GGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEKNTMRLNFDEDKIMEGIKRLAETIK |
10 | 6b9oA2 | 0.05 | 0.04 | 0.80 | 0.83 | DEthreader | | LKDYVRMLSGYYLATRQLFKKSTKDLADALGIAQHDAVSG--T----AKQHTTNDYAKRLAIGASKAEAVVSSSLAAFSQ--CH-LFNIYVRGNYYTGQEPSHYEPS-------LTKVELLFAQKIEEL--RE-EKSE---D---FVVELG-----EI-RT--FLLQ-F |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|