>PF09863 (308 residues) ELDDYLSRANDVQRPDIDARLNHLHRVTTRKPNWEELCVLAFDHRVQFVDMVREAGADFD SIKPLKKLILQASQEVAKEAGLQGKAGILCDGTFGQDVLNEVTGSGWWIGRPIELPGSRP LCLEHGNIGSQLVNWPLEHVVKCLAFFHPDDQHPLRLEQESMIKEVYAACCQSGHELLLE VILPADMPSSDDLYLRAVQRFYNLGVKPDWWKLPPQSVEGWNNISAVITERDTYCRGVVI LGLDAPEAELKAGFTAAANQPLVKGFAVGRTIFGQPSRDWLAGNIDDRALIEKIKANYHN LITLWRQR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ELDDYLSRANDVQRPDIDARLNHLHRVTTRKPNWEELCVLAFDHRVQFVDMVREAGADFDSIKPLKKLILQASQEVAKEAGLQGKAGILCDGTFGQDVLNEVTGSGWWIGRPIELPGSRPLCLEHGNIGSQLVNWPLEHVVKCLAFFHPDDQHPLRLEQESMIKEVYAACCQSGHELLLEVILPADMPSSDDLYLRAVQRFYNLGVKPDWWKLPPQSVEGWNNISAVITERDTYCRGVVILGLDAPEAELKAGFTAAANQPLVKGFAVGRTIFGQPSRDWLAGNIDDRALIEKIKANYHNLITLWRQR | |||||||||||||||||||
1 | 3myoA | 0.15 | 0.14 | 0.88 | 1.33 | DEthreader | --------------------T-ITANKRHYLEHQGIISALAFDQRGALKQMMAAQGATVTQIETLKVLVSEELTP-Y-------ASSILLDPEYGLLATKVRA-NQTGLLLAYEKTGYRLPDCLVEWSVKRLKAAG-ADAIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDIYKLKPHKVNGAMSVFSDKRFGVDVLKVEVPAIKAFQDQEAASH-----L-PYIYLSAGVSAKLFQETLYFAAAGAQFSGVLCGRATWAGSVPVYITKGEEARKWLCEGFQNIDELNRVLEET | |||||||||||||
2 | 3myoA | 0.16 | 0.14 | 0.88 | 1.33 | DEthreader | --------------------T-ITANKRHYESHQGIISALAFDQRGALKQMMAAQGATVTQIETLKVLVSEELTPYA--------SSILLDPEYGLLATKVR-ANQTGLLLAYEKTGYRLPDCLVEWSVKRLKAAGA-DAIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYNSAYAKPHKVNGAMSVFSDKRFGVDVLKVEVPVIKAFQDQEAASH-----L-PYIYLSAGVSAKLFQETLYFAAAGAQFSGVLCGRATWAGSVPVYITKGEEARKWLCEGFQNIDELNRVLEET | |||||||||||||
3 | 3myoA | 0.16 | 0.14 | 0.89 | 4.45 | HHpred | ---------------ITANKRHYLEKVSH-Q---GIISALAFDQRGALKQMMAAHQATVTQIETLKVLVSEELTPYA--------SSILLDPEYGLLATKRANQTGLLLA--YEKTGYDATDCLVEWSVKRLKAAGAD-AIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDERILKPHKVNGAMSVFSDKRFGVDVLKVEVPVMAEAIKAFQDQEAHLPYI----YLSAGVSAKLFQETLYFAA-AAGASGVLCGRATWAGSVPVYITKGEARKWLCTEGFQNIDELNRVLEET | |||||||||||||
4 | 3myoA | 0.15 | 0.13 | 0.87 | 1.12 | DisCoVER | TI--------------------TANKRYLEKVSHGIISALAFDQRGALKQMM-AHQATVTQIETLKVLVSEELTPY--------ASSILLDPEYGLLATKVR--AQTGLLLAYEKTGYSLPDCLVEWSVKRLKAG--ADAIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDERYAKPHKVNGAMSVFSDKRFGVDVLKVEVPAIKAFQDQEAAS------HLPYIYLSAGVSAKLFQETLYFAAAGAQFSGVLCGRATWAGSVPVYITEDEARKWLCTEGFQNIDELNRVLAS- | |||||||||||||
5 | 3myoA | 0.15 | 0.14 | 0.89 | 0.82 | MRFsearch | -----------------ANKRHYLEKVSH----QGIISALAFDQRGALKQMMAAHQETVTQIETLKVLVSEELTPY--------ASSILLDPEYGLLATKVRAN-QTGLLLAYEKTGYDATDCLVEWSVKRLKAAG-ADAIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDERISKPHKVNGAMSVFSDKRFGVDVLKVEVYSQAEAIKAFQDQEAAS--HLPYIYLSAGVSAKLFQETLYFAAAAAQFSGVLCGRATWAGSVPVYITKDEARKWLCTEGFQNIDELNRVLEET | |||||||||||||
6 | 3myoA | 0.16 | 0.14 | 0.90 | 1.45 | SPARKS-K | --------------TITANKRHYLEKVSHQ----GIISALAFDQRGALKQMMAAHEATVTQIETLKVLVSEELTPYA--------SSILLDPEYGLLATKVRAN-QTGLLLAYEKTGYDTTSRLPDCLVKRLKAAGAD-AIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYNNSKLKPHKVNGAMSVFSDKRFGVDVLKVEVPSQAEAIKAFQDQEAASH--LPYIYLSAGVSAKLFQETLYFAAAAGQFSGVLCGRATWAGSVPVYITKGEDRKWLCTEGFQNIDELNRVLEET | |||||||||||||
7 | 3mmtA | 0.11 | 0.10 | 0.91 | 0.68 | MAPalign | -----------------SMNERLEDIA--LTLVGAGKGILAADETATIGKRFESIGVECDNRRAYREMLFTA-KEAMESA----ISGVILFDETLASLTDLIRDAGAVPGIKVDGAQETITEG-LDGLRERLKDYYGARFAKWRAVIAILPTRGAISQNAQALARYAALCQEAGLVPIVEPEVLGPSTRCFEVTKVVLHTVFKELVLFMILKPNMVVEEVAEKTVHVLKQTPAAVPGIAFLSGGQTDEEATAHLSAMNALPWKLTFSYGRALQAAALKAWGKNEN-IVVAQKAFCHRARMNHLAAL-G | |||||||||||||
8 | 3myoA | 0.15 | 0.14 | 0.90 | 0.70 | CEthreader | ------------------TITANKRHYLEKVSHQGIISALAFDQRGALKQMMAAHQATVTQIETLKVLVSEELTPYA--------SSILLDPEYGLLATKV-RANQTGLLLAYEKTGYRLPDCLVEWSVKRLKAAGA-DAIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDERILKPHKVNGAMSVFSDKRFGVDVLKVEVPSQAEAIKAFQDQEAASH--LPYIYLSAGVSAKLFQETLYFAAAAAQFSGVLCGRATWAGSVPVYITKGEDRKWLCTEGFQNIDELNRVLEET | |||||||||||||
9 | 3myoA | 0.16 | 0.15 | 0.90 | 1.15 | MUSTER | -------------TITA-NKRHYLEKVSHQ----GIISALAFDQRGALKQMMAAHQATVTQIETLKVLVSEELTPYA--------SSILLDPEYGLLATVRANQTGLLLAY--EKTGYDAPDCLVEWSVKRLKAAGAD-AIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDERKLKPHKVNGAMSVFSDKRFGVDVLKVEVPSQAEAIKAFQDQEAASH--LPYIYLSAGVSAKLFQETLYFAAAAAQFSGVLCGRATWAGSVPVYITKGEDRKWLCTEGFQNIDELNRVLEET | |||||||||||||
10 | 3myoA | 0.16 | 0.14 | 0.88 | 4.14 | HHsearch | -----------TIT---ANKRHYLEKVSH-Q---GIISALAFDQRGALKQMMAAHEATVTQIETLKVLVSEELT--------PYASSILLDPEYGLLATKRANQTGLLLA--YEKTGYDATTCLVEWSVKRLKAAGAD-AIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDERILKPHKVNGAMSVFSDKRFGVDVLKVEVPVMKAFQDQEAAS--HLP----YIYLSAGVSAKLFQETLYFAA-AAGASGVLCGRATWAGSVPVYITKGEARKWLCTEGFQNIDELNRVLEET | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |